MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-506-P2e

Family name MIR-506 (all species)
Seed UUGGCAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-507b
Paralogues Cfa-Mir-506-P1  Cfa-Mir-506-P2d  Cfa-Mir-506-P3a  Cfa-Mir-506-P3b  Cfa-Mir-506-P7 
Orthologues Cpo-Mir-506-o2  Dno-Mir-506-P2  Hsa-Mir-506-P2  Mml-Mir-506-P2  Mmu-Mir-506-P2  Ocu-Mir-506-P2  Rno-Mir-506-P2 
Node of Origin (locus) C. familiaris
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 115665393-115665450 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P2e)		 Mir-506-P1 chrX: 115652425-115652482 [-] UCSC Ensembl
Mir-506-P2d chrX: 115652721-115652779 [-] UCSC Ensembl
Mir-506-P3a chrX: 115658398-115658456 [-] UCSC Ensembl
Mir-506-P3b chrX: 115658609-115658666 [-] UCSC Ensembl
Mir-506-P2e chrX: 115665393-115665450 [-] UCSC Ensembl
Mir-506-P7 chrX: 115688019-115688076 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACAUUUAACCAAACUUUGUGCAGUGCCCCAUUCAAAAAGGUGCCAUUCAGGUAUACUAAAAUAUGAUUGGCACUUUUUUGAGUGUGGUAAUUCACAACAUGUACAACCACAAGUGG
Get precursor sequence
Structure
        10          20        30        40        50        
CCACAUUUAACCAAACU--|    CAG    C                 U   GGUAUA 
                   UUGUG   UGCC CAUUCAAAAAGGUGCCA UCA      C
                   AACAC   AUGG GUGAGUUUUUUCACGGU AGU      U
GGUGAACACCAACAUGUAC^    UUA    U                 U   AUAAAA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-506-P2e_5p*
mirBase accessionNone
Sequence 
0- CAUUCAAAAAGGUGCCAUUCA -21
Get sequence
Mature sequence

Cfa-Mir-506-P2e_3p
mirBase accessionMIMAT0034416
Sequence 
37- AUUGGCACUUUUUUGAGUGUG -58
Get sequence
Proposed targets TargetScanVert: cfa-miR-507b
miRDB: MIMAT0034416