MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-450-P2

Family name MIR-450 (all species)
Seed UUUGCGA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-450a
Paralogues Cfa-Mir-450-P1  Cfa-Mir-450-P3 
Orthologues Bta-Mir-450-P2  Cpo-Mir-450-P2  Dno-Mir-450-P2  Hsa-Mir-450-P2  Mml-Mir-450-P2  Mmu-Mir-450-P2  Ocu-Mir-450-P2  Rno-Mir-450-P2a  Rno-Mir-450-P2b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 105177456-105177512 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P2)		 Mir-450-P3 chrX: 105177287-105177344 [-] UCSC Ensembl
Mir-450-P2 chrX: 105177456-105177512 [-] UCSC Ensembl
Mir-542-v1 chrX: 105178359-105178417 [-] UCSC Ensembl
Mir-542-v2 chrX: 105178360-105178416 [-] UCSC Ensembl
Mir-15-P2c chrX: 105183139-105183201 [-] UCSC Ensembl
Mir-15-P1c chrX: 105183436-105183494 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGCCCUGCAAAGAAAGAUGCUGAACUGUUUUUGCGAUGUGUUCCUAAUAUGCAGUAUGAACAUAUUGGGAGCAUUUUGCAUGCAUGGUUUUGUAUCAAUAUACAGAUGAAAGGCU
Get precursor sequence
Structure
        10          20        30        40        50        
AAAGCCCUGCAAAGAAA--|    U       UUU     U             GCAGU 
                   GAUGC GAACUGU   UGCGA GUGUUCCUAAUAU     \
                   CUAUG UUUGGUA   ACGUU UACGAGGGUUAUA     A
UCGGAAAGUAGACAUAUAA^    U       CGU     U             CAAGU 
     110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-450-P2_5p
mirBase accessionMIMAT0001548
Sequence 
0- UUUUGCGAUGUGUUCCUAAUAU -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-450a
miRDB: MIMAT0001548
Star sequence

Cfa-Mir-450-P2_3p*
mirBase accessionNone
Sequence 
35- AUUGGGAGCAUUUUGCAUGCAU -57
Get sequence