| MirGeneDB ID | Cfa-Mir-3059 |
|---|
| Family name |
MIR-3059 (all species) |
|---|
| Seed |
UUCCUCU |
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| Species |
Dog (Canis familiaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
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| Orthologues |
Bta-Mir-3059
Cpo-Mir-3059
Dno-Mir-3059
Ete-Mir-3059
Hsa-Mir-3059
Mml-Mir-3059
Mmu-Mir-3059
Ocu-Mir-3059
Rno-Mir-3059
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(canFam3_add) |
chr15: 28107144-28107201 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUUUACACAGGUGUAACAGGUGGUACGCCCUUUCCUCUCUGCCCCAUAGGGUGUAGCUCUAACUACCCUCUAGGGAAGAGAAGGUUGGGUGAACAGCCUUACUAUUUCUCCAGCUCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUUACACAGGUGUAAC--| G A UUU - G CAU UAGC
AGGU GU CGCCC CCU CUCU CCC AGGGUG U
UCCG CA GUGGG GGA GAGA GGG UCCCAU C
GACUCGACCUCUUUAUCAU^ A A UU- A A AUC CAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-3059_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUUCCUCUCUGCCCCAUAGGGUGU -24
Get sequence
|
|---|
| Star sequence |
Cfa-Mir-3059_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CCUCUAGGGAAGAGAAGGUUGG -58
Get sequence
|
|---|
