| MirGeneDB ID | Cfa-Mir-1911 |
|---|
| Family name |
MIR-1911 (all species) |
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| Seed |
GAGUACC |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-1911
Hsa-Mir-1911
Mml-Mir-1911
Ocu-Mir-1911
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(canFam3_add) |
chrX: 87505482-87505540 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGUAUCCAUCAUCAUUUGCUGGGCAUCUGCUGAGUACCGCCAUGUCUGUUGGGCGUCCACUAUCUCCCACCAGGCAUUGUGGUCUCUGCUGAUGCUCUGCCAUUUCACCACCAUGAGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGUAUCCAUCAUCAUUU--| U U U U C U CGUCC
GC GGGCAUC GC GAG ACCGC AUGUCUG UGGG A
CG CUCGUAG CG CUC UGGUG UACGGAC ACCC C
AAGAGUACCACCACUUUAC^ U U U - U C UCUAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-1911_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGAGUACCGCCAUGUCUGUUGGG -23
Get sequence
|
|---|
| Star sequence |
Cfa-Mir-1911_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CACCAGGCAUUGUGGUCUCUGC -59
Get sequence
|
|---|
