MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmu-Mir-187  Mun-Mir-187  Oan-Mir-187  Ocu-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(canFam3_add)		 chr7: 54261947-54262004 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGCUCGCCACGACUCGGUGUGAGACCUCGGGCUACAACACGGGACCCGGGCGCUGCUCCGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCCACAGCAGAGCCUGCAC
Get precursor sequence
Structure
        10           20        30        40        50        
CGGCUCGCCACGACUCGG---|   AGA    G    A           C    CGCUGC 
                     UGUG   CCUC GGCU CAACACGGGAC CGGG      U
                     ACGC   GGAG CCGA GUUGUGUUCUG GCUC      C
CACGUCCGAGACGACACCUGG^   AG-    G    C           U    CCCAGC 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut +1 on the 5p arm. The 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-187_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGCUACAACACGGGACCCGGGC -22
Get sequence
Mature sequence

Cfa-Mir-187_3p
mirBase accessionMIMAT0009843
Sequence 
36- UCGUGUCUUGUGUUGCAGCCGG -58
Get sequence
Proposed targets TargetScanVert: cfa-miR-187
miRDB: MIMAT0009843