| MirGeneDB ID | Cfa-Mir-1251 |
|---|
| Family name |
MIR-1251 (all species) |
|---|
| Seed |
CUCUAGC |
|---|
| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-1251
Cpo-Mir-1251
Dno-Mir-1251
Ete-Mir-1251
Hsa-Mir-1251
Mdo-Mir-1251
Mml-Mir-1251
Mmu-Mir-1251
Ocu-Mir-1251
Rno-Mir-1251
Sha-Mir-1251
|
|---|
| Node of Origin (locus) |
Theria
|
|---|
| Node of Origin (family) |
Theria
|
|---|
Genome context
(canFam3_add) |
chr15: 37111042-37111100 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CACCCGAGCAUCCAUGGGUCAGCUAUGUAGACUCUAGCUGCCAAAGGCGCUUCUCCUUCUGAACAGAGCGCUUUGCUCAGCCAGUGUAGACAUGGCCUGAUAAACAAUGGAACUUCUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CACCCGAGCAUCCAUGG- -| AG U A CCA UCUCCUU
GUCA GCUAUGU AC CU GCUG AAGGCGCU \
UAGU CGGUACA UG GA CGAC UUUCGCGA C
CCUCUUCAAGGUAACAAA C^ GA U C UCG GACAAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-1251_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACUCUAGCUGCCAAAGGCGCU -21
Get sequence
|
|---|
| Star sequence |
Cfa-Mir-1251_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CGCUUUGCUCAGCCAGUGUAG -59
Get sequence
|
|---|
