MirGeneDB 2.1

MirGeneDB ID

Cel-Mir-73-P2

Family name MIR-73 (all species)
Seed GGCAAGA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-74
Paralogues Cel-Mir-73-P1 
Orthologues Cbr-Mir-73-P2a  Cbr-Mir-73-P2b 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)
chrX: 2369062-2369124 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-73-P2)
Mir-73-P1 chrX: 2368787-2368848 [+] UCSC Ensembl
Mir-73-P2 chrX: 2369062-2369124 [+] UCSC Ensembl
Mir-9-P14 chrX: 2372475-2372534 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUACAAAGCAAAAUGGUUCAAAAAACGUUCGGGCUUCCAUCUCUUUCCCAGCCUACAUCUCAACCUGGGCUGGCAAGAAAUGGCAGUCUACACGUUUUUCAACCAAAUGCUAUGGCCUUUUU
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Structure
        10        20          30        40        50        60 
ACUACAAAGCAAAAUGGUUCA--|       UC     U    C    UC     CUACAUC 
                       AAAAACGU  GGGCU CCAU UCUU  CCAGC       U
                       UUUUUGCA  UCUGA GGUA AGAA  GGUCG       C
UUUUUCCGGUAUCGUAAACCAAC^       CA     C    A    C-     GGUCCAA 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Wt Da Ea Mi Yo Yo
Star sequence

Cel-Mir-73-P2_5p*

mirBase accessionMIMAT0020320
Sequence
0- CGGGCUUCCAUCUCUUUCCCAGC -23
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Mature sequence

Cel-Mir-73-P2_3p

mirBase accessionMIMAT0000046
Sequence
41- UGGCAAGAAAUGGCAGUCUACA -63
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Proposed targets microrna.org: MIMAT0000046
TargetScanWorm: cel-miR-74