MirGeneDB 2.1

MirGeneDB ID

Cel-Mir-230

Family name MIR-230 (all species)
Seed CUUGGUC
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-230
Paralogues
Orthologues Cbr-Mir-230 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)
chrX: 5803908-5803974 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-230)
Mir-230 chrX: 5803908-5803974 [+] UCSC Ensembl
Mir-791 chrX: 5809361-5809423 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUUGUCUGAUGUUGAUGUAAUGCCGUCACUUGGUCGGCGAUUUAAUAUUAUCAGAACAUAGGAAAUUGUUAGUAUUAGUUGUGCGACCAGGAGACGGUAUUCGCAUAUUUCUUAAAUAUUCAUU
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Structure
        10         20         30         40        50        60   
UUUUUUGUCUGAUGUUG-    -         A        -|     U       UCAGAACAU 
                  AUGU AAUGCCGUC CUUGGUCG GCGAUU AAUAUUA         \
                  UACG UUAUGGCAG GGACCAGC UGUUGA UUAUGAU         A
UUACUUAUAAAUUCUUUA    C         A        G^     -       UGUUAAAGG 
     120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Wt Da Ea Mi Yo Yo
Mature sequence

Cel-Mir-230_5p

mirBase accessionMIMAT0015113
Sequence
0- ACUUGGUCGGCGAUUUAAUAUUA -23
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Proposed targets microrna.org: MIMAT0015113
Co-mature sequence

Cel-Mir-230_3p

mirBase accessionMIMAT0000285
Sequence
44- GUAUUAGUUGUGCGACCAGGAGA -67
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Proposed targets microrna.org: MIMAT0000285
TargetScanWorm: cel-miR-230