MirGeneDB 2.1

MirGeneDB ID

Cel-Mir-1832-P2

Family name MIR-1832 (all species)
Seed GUGGGCA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-1832b
Paralogues Cel-Mir-1832-P1 
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)
chrIV: 17092861-17092927 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUUUCAAUUUUGACUAACUUCGACCAAUCAGCGAAUCGCUCGGCCCACUUUUGUGAACCAAUCAGCGUCAAAAGUGGGCAGAGCGAUUCGCUGAUUGGUCGUUAUCAUUUUGAAAGGAAUUAAGC
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Structure
        10        20          30        40        50        60   
AUUUUUCAAUUUUGACUAACUU--|                    G         UGUGAACCA 
                        CGACCAAUCAGCGAAUCGCUC GCCCACUUU         \
                        GCUGGUUAGUCGCUUAGCGAG CGGGUGAAA         A
CGAAUUAAGGAAAGUUUUACUAUU^                    A         ACUGCGACU 
     120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Wt Da Ea Mi Yo Yo
Star sequence

Cel-Mir-1832-P2_5p*

mirBase accessionMIMAT0011449
Sequence
0- CAGCGAAUCGCUCGGCCCACUUU -23
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Proposed targets microrna.org: MIMAT0011449
Mature sequence

Cel-Mir-1832-P2_3p

mirBase accessionMIMAT0011450
Sequence
44- AGUGGGCAGAGCGAUUCGCUGAU -67
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Proposed targets microrna.org: MIMAT0011450
TargetScanWorm: cel-miR-1832b