MirGeneDB 2.1

MirGeneDB ID

Cel-Mir-1832-P1

Family name MIR-1832 (all species)
Seed GGGCGGA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-1832a
Paralogues Cel-Mir-1832-P2 
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)
chrIII: 11829248-11829311 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUCAAGCUCAGAUUUGAAUUCCGACCAAUCAGCGAUUCGAACUCCGCCCACUGCACCUGAUUGGUUGACAAGUGGGCGGAGCGAAUCGAUGAUUGGUCGGGGGUUCUCAUUUUGGAGGGAAUU
Get precursor sequence
Structure
        10          20        30        40        50        60  
AAUCAAGCUCAGAUUUGAA--|            G       AA           GCACCUGA 
                     UUCCGACCAAUCA CGAUUCG  CUCCGCCCACU        U
                     GGGGCUGGUUAGU GCUAAGC  GAGGCGGGUGA        U
UUAAGGGAGGUUUUACUCUUG^            A       --           ACAGUUGG 
  120       110       100        90          80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Wt Da Ea Mi Yo Yo
Star sequence

Cel-Mir-1832-P1_5p*

mirBase accessionMIMAT0032039
Sequence
0- CAGCGAUUCGAACUCCGCCCACU -23
Get sequence
Mature sequence

Cel-Mir-1832-P1_3p

mirBase accessionMIMAT0006774
Sequence
43- UGGGCGGAGCGAAUCGAUGAU -64
Get sequence
Proposed targets microrna.org: MIMAT0006774
TargetScanWorm: cel-miR-1832