MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-7596

Family name MIR-7596 (all species)
Seed GGAAUGG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7596
Paralogues
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)
X: 1390882-1390938 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUAUAAUAAACCCGAAUUCUUCUAACAAGUUGGAAUGGCUUACGAGACCAACAAUGAGAUUAUCGUUGACCUCGGAGUCAAGCCAACUGGUUAGUGAGAUAUCCAUGUUUCAAGUAU
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Structure
        10         20         30        40        50        
GUAUAAUAAACCCGAAU-    -|    A      AA      A    AC    AAUGA 
                  UCUU CUAAC AGUUGG  UGGCUU CGAG  CAAC     G
                  AGAG GAUUG UCAACC  ACUGAG GCUC  GUUG     A
UAUGAACUUUGUACCUAU    U^    G      GA      -    CA    CUAUU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Mature sequence

Cbr-Mir-7596_5p

mirBase accessionMIMAT0029604
Sequence
0- UGGAAUGGCUUACGAGACCAAC -22
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Star sequence

Cbr-Mir-7596_3p*

mirBase accessionNone
Sequence
36- UGACCUCGGAGUCAAGCCAAC -57
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