MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-7594-P2b

Family name MIR-7594 (all species)
Seed GAGGUAG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7594b-2
Paralogues Cbr-Mir-7594-P1a  Cbr-Mir-7594-P1b  Cbr-Mir-7594-P2a 
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)
III: 10733443-10733505 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUAUUCUGUAAACCGUUGCUUCGUGUUUCCGGGACUGAUCGUAGCCUUCAACACUCGAAGCGAAGUGUUGAGGUAGACGUUUAGCCCGAAAACAAGUUGAAUAACGGUCCUUUUGUAUGGG
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Structure
        10        20           30        40        50        60 
UAUUAUUCUGUAAACCGUUGC    ---|    C    A    U   AGC       ACUCGA 
                     UUCG   UGUUU CGGG CUGA CGU   CUUCAAC      A
                     AAGU   ACAAA GCCC GAUU GCA   GGAGUUG      G
GGGUAUGUUUUCCUGGCAAU-    UGA^    A    -    U   GAU       UGAAGC 
 120       110        100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-7594-P2b_5p*

mirBase accessionNone
Sequence
0- CCGGGACUGAUCGUAGCCUUCAAC -24
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Mature sequence

Cbr-Mir-7594-P2b_3p

mirBase accessionMIMAT0029601
Sequence
40- UGAGGUAGACGUUUAGCCCGAAA -63
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