MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-392

Family name MIR-392 (all species)
Seed UCAUCGA
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-392
Paralogues
Orthologues Cel-Mir-392-v1  Cel-Mir-392-v2 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)
X: 19329050-19329110 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAUCUUUUUAAAAUCCUGCAUUUAUCUGACAUCUCACAUUAUUGAGGAUAUAAACUAAAUAAAGAAAUAUCAUCGAUCAUGUGAGCUGUUAGAUUAUCAGAUUUCUAUGGAUUCUUCAUA
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Structure
        10        20          30        40        50          
UUAUCUUUUUAAAAUCCUGCAUUU--|       U       U     G     AAACUAA 
                          AUCUGACA CUCACAU AUUGA GAUAU       \
                          UAGAUUGU GAGUGUA UAGCU CUAUA       A
AUACUUCUUAGGUAUCUUUAGACUAU^       C       C     A     AAGAAAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-392_5p*

mirBase accessionNone
Sequence
0- CAUCUCACAUUAUUGAGGAUAU -22
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Mature sequence

Cbr-Mir-392_3p

mirBase accessionMIMAT0004299
Sequence
39- AUCAUCGAUCAUGUGAGCUGUU -61
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