MirGeneDB ID | Cbr-Mir-355 |
Family name |
MIR-355 (all species) |
Seed |
UUGUUUU |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-355
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Paralogues |
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Orthologues |
Cel-Mir-355
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Node of Origin (locus) |
Caenorhabditis
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Node of Origin (family) |
Caenorhabditis
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Genome context (CB4) |
II: 7347353-7347411 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
ACUGAUUAUGAUUAGUCAGCAAUCGGAUGGUUUGUUUUAGCCUGAGCUAUGUGUUAUUGCAUAUUCAUAGCUACUUGCUAAAACAUACCAAUCGAGUUGACUGACAUUCUUUGUUAUAC
Get precursor sequence
|
Structure | 10 20 30 40 50
ACUGAUUAUGAUUAGUCAG- - A U CUG-| UGUUAU
CAA UCGG UGGU UGUUUUAGC AGCUAUG U
GUU AGCU ACCA ACAAAAUCG UCGAUAC G
CAUAUUGUUUCUUACAGUCA G A U UUCA^ UUAUAC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
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3' NTU |
Unknown
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Motifs | UGUG in loop |
Tissue expression
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Cb |
Ea |
Ma |
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Mature sequence |
Cbr-Mir-355_5p |
mirBase accession | MIMAT0001319 |
Sequence |
0- UUUGUUUUAGCCUGAGCUAUG -21
Get sequence
|
Star sequence |
Cbr-Mir-355_3p* (predicted) |
mirBase accession | None |
Sequence |
37- UAGCUACUUGCUAAAACAUACC -59
Get sequence
|