MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-7180

Family name MIR-7180 (all species)
Seed GUGGCCU
Species Cow (Bos taurus)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-7180  Dno-Mir-7180  Mml-Mir-7180  Ocu-Mir-7180 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037343.1: 32263798-32263855 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGACUUUCUGAUUAUUGGUGGUCUCAGGGAGUGUACUUCCUGGGGCCUCUGGGCAUAUAAUUCCUGUGGCCUCUGGGUGUGUACCCUCUGUGGCUUCCAGGUUUGGACAGCUGCAGC
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Structure
        10          20        30        40        50        
GAGACUUUCUGAUUAUU--| U    U     A      U   U      UCU  GCAU 
                   GG GGUC CAGGG GUGUAC UCC GGGGCC   GG    A
                   CC UCGG GUCUC CAUGUG GGG CUCCGG   CC    U
CGACGUCGACAGGUUUGGA^ U    U     C      U   U      UGU  UUAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-7180_5p*

mirBase accessionNone
Sequence
0- AGUGUACUUCCUGGGGCCUCUGG -23
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Mature sequence

Bta-Mir-7180_3p

mirBase accessionNone
Sequence
35- UGUGGCCUCUGGGUGUGUACCCU -58
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