MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-6715

Family name MIR-6715 (all species)
Seed CAAACCA
Species Cow (Bos taurus)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-6715  Cpo-Mir-6715  Ete-Mir-6715  Hsa-Mir-6715  Mml-Mir-6715  Mmu-Mir-6715  Ocu-Mir-6715  Rno-Mir-6715 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037353.1: 32830993-32831050 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAACGGUUGCCUUCAUGUCGGGCUAUGUUCACAGGCACGGCCAGUUUGAGCAUUUUCACUGAAUUGCCAAACCAGUUGUGCCUGUAGACACAACCUUUACCCGCAACAAGUCUCCCCA
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Structure
        10           20        30        40        50        
AAACGGUUGCCUUCAUGUC---|  CUA   UC           CA     A   UUUUC 
                      GGG   UGU  ACAGGCACGGC  GUUUG GCA     A
                      UCC   ACA  UGUCCGUGUUG  CAAAC CGU     C
ACCCCUCUGAACAACGCCCAUU^  AAC   GA           AC     -   UAAGU 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-6715_5p*

mirBase accessionNone
Sequence
0- ACAGGCACGGCCAGUUUGAGCA -22
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Mature sequence

Bta-Mir-6715_3p

mirBase accessionNone
Sequence
36- CCAAACCAGUUGUGCCUGUAGA -58
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