| MirGeneDB ID | Bta-Mir-652 |
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| Family name |
MIR-652 (all species) |
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| Seed |
AUGGCGC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-652
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| Paralogues |
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| Orthologues |
Cfa-Mir-652
Cpo-Mir-652
Dno-Mir-652
Ete-Mir-652
Hsa-Mir-652
Mml-Mir-652
Mmu-Mir-652
Ocu-Mir-652
Rno-Mir-652
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 58480905-58480966 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAGGGCCACCACGAAUGGCUAUGCACUGCACAACCCUAGGAGAGGGUGCCAUUCACAUAGACUAGAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGCACAACCUACACACCUAUACUCGGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCAGGGCCACCACGAAU-| CUA GAGAG CAUAGA
GG UGCACUGCACAACCCUAG GGUGCCAUUCA \
CC ACGUGACGUGUUGGGAUC CCGCGGUAAGU C
UGGCUCAUAUCCACACAU^ AAC A---- UAAGAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Yes
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-652_5p* |
| mirBase accession | None |
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| Sequence |
0- ACAACCCUAGGAGAGGGUGCCAUUCA -26
Get sequence
|
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| Mature sequence |
Bta-Mir-652_3p |
| mirBase accession | MIMAT0024578 |
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| Sequence |
41- AAUGGCGCCACUAGGGUUGUG -62
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-652
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