MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-504

Family name MIR-504 (all species)
Seed GACCCUG
Species Cow (Bos taurus)
MiRBase ID bta-mir-504
Paralogues
Orthologues Cfa-Mir-504-v1  Cfa-Mir-504-v2  Cpo-Mir-504-v1  Cpo-Mir-504-v2  Dno-Mir-504-v1  Dno-Mir-504-v2  Ete-Mir-504-v1  Ete-Mir-504-v2  Hsa-Mir-504-v1  Hsa-Mir-504-v2  Mml-Mir-504-v1  Mml-Mir-504-v2  Mmu-Mir-504-v1  Mmu-Mir-504-v2  Ocu-Mir-504-v1  Ocu-Mir-504-v2  Rno-Mir-504-v1  Rno-Mir-504-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 22089371-22089429 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUGGAACGUUGACGAGGCUGCUGUUGGGAGACCCUGGUCUGCACUCUGUCUGUAUGCUUACUGAAGGGAGCGCAGGGCAGGGUUUCCCAUACAGAGGGCACAGGCAACCACUGCAUG
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Structure
        10        20          30        40        50         
AAGUGGAACGUUGACGAG   G-    -            G     A    G-| UGUAU 
                  GCU  CUGU UGGGAGACCCUG UCUGC CUCU  UC     G
                  CGG  GACA ACCCUUUGGGAC GGACG GAGG  AG     C
GUACGUCACCAACGGACA   GA    U            G     C    GA^ UCAUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-504_5p

mirBase accessionMIMAT0009340
Sequence
0- AGACCCUGGUCUGCACUCUGUCU -23
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Proposed targets TargetScanVert: bta-miR-504
Star sequence

Bta-Mir-504_3p*

mirBase accessionNone
Sequence
36- AGGGAGCGCAGGGCAGGGUUUCC -59
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