MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-459

Family name MIR-459 (all species)
Seed CAGUAAC
Species Cow (Bos taurus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-459  Cfa-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037328.1: 148014653-148014713 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCCAUCACCACCAGACUAUUAUUUGCAAUCAGUAACAAAGAUUCAUCCUUGUGUCCAUCAAGCAACAAGGAGAAUCUUUGUCACUAAGUGUAAAUAAUAGCUACACUUCACAUUAGAAG
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Structure
        10          20        30        40        50        60
UCUCCAUCACCACCAGA--|           AUC   A          A       GUCCA 
                   CUAUUAUUUGCA   AGU ACAAAGAUUC UCCUUGU     U
                   GAUAAUAAAUGU   UCA UGUUUCUAAG AGGAACA     C
GAAGAUUACACUUCACAUC^           GAA   C          -       ACGAA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-459_5p

mirBase accessionNone
Sequence
0- UCAGUAACAAAGAUUCAUCCUUGU -24
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Star sequence

Bta-Mir-459_3p*

mirBase accessionNone
Sequence
38- AAGGAGAAUCUUUGUCACUAAGU -61
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