MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-433

Family name MIR-433 (all species)
Seed UCAUGAU
Species Cow (Bos taurus)
MiRBase ID bta-mir-433
Paralogues
Orthologues Cfa-Mir-433  Cpo-Mir-433  Dno-Mir-433  Ete-Mir-433  Hsa-Mir-433  Mml-Mir-433  Mmu-Mir-433  Ocu-Mir-433  Rno-Mir-433 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037348.1: 65779607-65779680 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-433)
Mir-493 NC_037348.1: 65766695-65766757 [+] UCSC Ensembl
Mir-431 NC_037348.1: 65778736-65778799 [+] UCSC Ensembl
Mir-433 NC_037348.1: 65779607-65779680 [+] UCSC Ensembl
Mir-127 NC_037348.1: 65780711-65780766 [+] UCSC Ensembl
Mir-432 NC_037348.1: 65782197-65782265 [+] UCSC Ensembl
Mir-136-v2 NC_037348.1: 65782383-65782439 [+] UCSC Ensembl
Mir-136-v1 NC_037348.1: 65782384-65782439 [+] UCSC Ensembl
Mir-370 NC_037348.1: 65808196-65808252 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGAAGACCCAGUGGCCGGGGAGAAGUACGGUGAGCCUGUCAUUGUUCAGAGAGGCUAGAUCCUCCUUGUUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCAUGAAGG
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Structure
        10           20        30        40        50        60      
GAAGAAGAAGACCCAGUG---|  GG      GUA   U           U    AGAGAGGCUAGAU 
                     GCC  GGAGAA   CGG GAGCCUGUCAU GUUC             C
                     UGG  CCUCUU   GCU CUCGGGUAGUA UAGG             C
GGAAGUACCACACCACGGCGA^  A-      GUG   C           C    AAGAGUUGUUCCU 
  130       120       110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-433_5p*

mirBase accessionNone
Sequence
0- UACGGUGAGCCUGUCAUUGUUC -22
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Mature sequence

Bta-Mir-433_3p

mirBase accessionMIMAT0009318
Sequence
52- AUCAUGAUGGGCUCCUCGGUGU -74
Get sequence
Proposed targets TargetScanVert: bta-miR-433