MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-430-P4

Family name MIR-430 (all species)
Seed AAGUGCU
Species Cow (Bos taurus)
MiRBase ID bta-mir-302d
Paralogues Bta-Mir-430-P1  Bta-Mir-430-P2  Bta-Mir-430-P3  Bta-Mir-430-P5  Bta-Mir-430-P7 
Orthologues Ami-Mir-430-P4  Cfa-Mir-430-P4  Cli-Mir-430-P4  Cmi-Mir-430-P4  Cpi-Mir-430-P4  Cpo-Mir-430-P4  Dno-Mir-430-P4  Ete-Mir-430-P4  Gga-Mir-430-P4  Hsa-Mir-430-P4  Mdo-Mir-430-P4  Mml-Mir-430-P4  Mmu-Mir-430-P4  Oan-Mir-430-P4  Ocu-Mir-430-P4  Rno-Mir-430-P4  Spt-Mir-430-P4  Sto-Mir-430-P4  Tgu-Mir-430-P4  Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xtr-Mir-430-o4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037333.1: 12980950-12981012 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P4)
Mir-430-P1 NC_037333.1: 12980223-12980284 [+] UCSC Ensembl
Mir-430-P2 NC_037333.1: 12980362-12980421 [+] UCSC Ensembl
Mir-430-P3 NC_037333.1: 12980774-12980834 [+] UCSC Ensembl
Mir-430-P4 NC_037333.1: 12980950-12981012 [+] UCSC Ensembl
Mir-92-P2a NC_037333.1: 12981076-12981135 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUUUUAAAGCUAUUAAGGAAUACCCUCUACUUUAACAUGGAGGCACUUGCUGUGACUUCAUAAAAAAAUAAGUGCUUCCAUGUUUUAGUGCGGUGGUUCCUUUUUAAACCUCAACAUUGUG
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Structure
        10           20        30        40        50        60 
UAUUUUUAAAGCUAUUA---|     AC  UC    UU                CUGUGACUU 
                    AGGAAU  CC  UACU  AACAUGGAGGCACUUG         \
                    UCCUUG  GG  GUGA  UUGUACCUUCGUGAAU         C
GUGUUACAACUCCAAAUUUU^     GU  C-    UU                AAAAAAAUA 
 120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-430-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- ACUUUAACAUGGAGGCACUUGCU -23
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Mature sequence

Bta-Mir-430-P4_3p

mirBase accessionMIMAT0009279
Sequence
40- UAAGUGCUUCCAUGUUUUAGUGC -63
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Proposed targets TargetScanVert: bta-miR-302d