| MirGeneDB ID | Bta-Mir-335 |
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| Family name |
MIR-335 (all species) |
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| Seed |
CAAGAGC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-335
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| Paralogues |
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| Orthologues |
Cfa-Mir-335
Cpo-Mir-335
Dno-Mir-335
Ete-Mir-335
Hsa-Mir-335
Mml-Mir-335
Mmu-Mir-335
Ocu-Mir-335
Rno-Mir-335
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037331.1: 94255096-94255153 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGAUCGGAAAAGAUUACUUUUGGGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCUCAUUUGCUGUACUCAAUAAAAAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGAUCGGAAAAGAUUACUUU--| C A C UUUGU
UGGG GGGGGUCA GAGCAAUAA GAAAAAUG C
ACUC CCUCCAGU CUCGUUAUU CUUUUUGC A
UGAAAAAUAACUCAUGUCGUUU^ U C A CAAAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-335_5p |
| mirBase accession | MIMAT0009291 |
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| Sequence |
0- UCAAGAGCAAUAACGAAAAAUG -22
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-335
|
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| Star sequence |
Bta-Mir-335_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- UUUUUCAUUAUUGCUCCUGACC -58
Get sequence
|
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