| MirGeneDB ID | Bta-Mir-3085 |
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| Family name |
MIR-3085 (all species) |
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| Seed |
CUGGCUG |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cfa-Mir-3085
Cpo-Mir-3085
Dno-Mir-3085
Ete-Mir-3085
Hsa-Mir-3085
Mml-Mir-3085
Mmu-Mir-3085
Ocu-Mir-3085
Rno-Mir-3085
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037353.1: 19015686-19015746 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCUGCUCAGCCACCAGCCCUGCUCUGGGGAGGUGCCAUUCUGAGGGCCAGGAGUUUGAUUAUGAGUCACUCUGGCUGCUAUGGCCCCCUCCCAGGGUCUGGGCAUCGCACCUUGACCAGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUCUGCUCAGCCACCAG- U-| GA U UCUGAG G UUGAUU
CCC GCUCUGGG GG GCCAU GGCCAG AGU \
GGG UGGGACCC CC CGGUA UCGGUC UCA A
CGACCAGUUCCACGCUAC UC^ UC C UCG--- - CUGAGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-3085_5p* |
| mirBase accession | None |
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| Sequence |
0- AGGUGCCAUUCUGAGGGCCAGGAGU -25
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-3085_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UCUGGCUGCUAUGGCCCCCUC -61
Get sequence
|
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