MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-15-P2d

Family name MIR-15 (all species)
Seed AGCAGCA
Species Cow (Bos taurus)
MiRBase ID bta-mir-195
Paralogues Bta-Mir-15-P1a  Bta-Mir-15-P1b  Bta-Mir-15-P1c  Bta-Mir-15-P1d  Bta-Mir-15-P2a  Bta-Mir-15-P2b  Bta-Mir-15-P2c 
Orthologues Aca-Mir-15-P2d  Ami-Mir-15-P2d  Cfa-Mir-15-P2d  Cin-Mir-15-P2  Cpo-Mir-15-P2d  Dno-Mir-15-P2d  Dre-Mir-15-P2d  Ete-Mir-15-P2d  Gja-Mir-15-P2d  Hsa-Mir-15-P2d  Loc-Mir-15-P2d  Mal-Mir-15-P2d  Mdo-Mir-15-P2d  Mml-Mir-15-P2d  Mmu-Mir-15-P2d  Oan-Mir-15-P2d  Ocu-Mir-15-P2d  Rno-Mir-15-P2d  Sha-Mir-15-P2d  Sto-Mir-15-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037346.1: 26807519-26807579 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2d)		 Mir-15-P2d NC_037346.1: 26807519-26807579 [-] UCSC Ensembl
Mir-15-P1d NC_037346.1: 26807843-26807904 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGUUGCCCACGCCCAGCUCCCCUGGCUCUAGCAGCACAGAAAUAUUGGCACUGGGAAGAAAGCCUGCCAAUAUUGGCUGUGCUGCUCCAGGCAGGGUGGUGAGAGCUGCCGAGGAGGGG
Get precursor sequence
Structure
        10          20        30        40         50         
UUUGUUGCCCACGCCCA--  UC     G  CU          A-|         CUGGGA 
                   GC  CCCUG CU  AGCAGCACAG  AAUAUUGGCA      A
                   UG  GGGAC GA  UCGUCGUGUC  UUAUAACCGU      G
GGGGAGGAGCCGUCGAGAG  GU     G  CC          GG^         CCGAAA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-15-P2d_5p
mirBase accessionMIMAT0004335
Sequence 
0- UAGCAGCACAGAAAUAUUGGCA -22
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Proposed targets TargetScanVert: bta-miR-195
Star sequence

Bta-Mir-15-P2d_3p*
mirBase accessionNone
Sequence 
38- CCAAUAUUGGCUGUGCUGCUCCA -61
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