| MirGeneDB ID | Bge-Novel-3 |
|---|
| Family name |
BGE-NOVEL-3 (all species) |
|---|
| Seed |
AGGAAAG |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
B. germanica
|
|---|
| Node of Origin (family) |
B. germanica
|
|---|
Genome context
(Bger_2.0) |
KZ614998.1: 490211-490267 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAUAUACUCGAUCUCAAUCAAGGAAAAUGUAAGGAAAGCUUAGGCGUAUGUUAGUUCAUUUAAACCUACGCCUGAUGCUUUCCCAAUCUUCUGGAGUCCGCGGUCGAGGUCAAAUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUAUACUCGAUCUCAA-----| AA A GUAA - U AGUU
UC GGAA AU GGAAAGC UUAGGCGUA GUU C
AG UCUU UA CCUUUCG AGUCCGCAU CAA A
GGUAAACUGGAGCUGGCGCCUG^ G- C AC-- U C AUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bge-Novel-3_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAGGAAAGCUUAGGCGUAUGUU -22
Get sequence
|
|---|
| Star sequence |
Bge-Novel-3_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- CCUACGCCUGAUGCUUUCCCAAU -57
Get sequence
|
|---|
