MirGeneDB 2.1

MirGeneDB ID

Bge-Novel-19

Family name BGE-NOVEL-19 (all species)
Seed AAGGCUC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)
KZ614838.1: 686992-687051 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGUGCAGCAUUGAAACGUCGUGGAAUUUUAAGGCUCAUAUGCGCAAGACUAUGUUAAUGAUAUUAGUUUUGAUCAUGUAAGCCUUUAUAUAACACGAUAUCUAACAUCAAAUUCCGGC
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Structure
        10          20        30        40        50         
GGUGUGCAGCAUUGAAAC--|     GA  UUU      C     CG       AUGUUA 
                    GUCGUG  AU   AAGGCU AUAUG  CAAGACU      A
                    UAGCAC  UA   UUCCGA UGUAC  GUUUUGA      U
CGGCCUUAAACUACAAUCUA^     AA  UAU      A     UA       UUAUAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Novel-19_5p

mirBase accessionNone
Sequence
0- UAAGGCUCAUAUGCGCAAGACU -22
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Star sequence

Bge-Novel-19_3p*

mirBase accessionNone
Sequence
38- UUUUGAUCAUGUAAGCCUUUAU -60
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