| MirGeneDB ID | Bge-Novel-13 |
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| Family name |
BGE-NOVEL-13 (all species) |
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| Seed |
AUGUUAA |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ618990.1: 32989-33049 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUCAGAGAAAAAUGGAGGUGAAAUCAUCCUCAUUAAAACCAUCAAUAUAUGUGGAACAAGAAGCGACAUAUGUUAAUGGUUUUAAUGAGGAUGAUGAUGAUAAGAAGCCACUUUUCGCUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUCAGAGAAAAAUGGAGGUGAA--| C UGGAACA
AUCAUCCUCAUUAAAACCAU AAUAUAUG \
UAGUAGGAGUAAUUUUGGUA UUGUAUAC A
UUCGCUUUUCACCGAAGAAUAGUAG^ A AGCGAAG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Novel-13_5p* |
| mirBase accession | None |
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| Sequence |
0- UCAUUAAAACCAUCAAUAUAUG -22
Get sequence
|
|---|
| Mature sequence |
Bge-Novel-13_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAUGUUAAUGGUUUUAAUGAGG -61
Get sequence
|
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