| MirGeneDB ID | Bge-Mir-6012 |
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| Family name |
MIR-6012 (all species) |
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| Seed |
GGCUGAC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ616466.1: 152009-152075 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGGAGGUCUAACAGUUGGGGCGGGGUUUACAGGCUGACCUCUUCACCUGUGGAAAUGUGAAUUGAGAUUAGACAUUUCGGCGAUGAGAUCAGCCAGUAGAACCCAGUCCAGAGCGAACAAGGAUCAU
Get precursor sequence
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| Structure | 10 20 30 40 50 60
AGGAGGUCUAACAGUUG- G -| A C U A UGUG GUGAAUUG
GGGC GGG UUUAC GGCUGA CUC UC CC GAAAU \
CCUG CCC AGAUG CCGACU GAG AG GG CUUUA A
UACUAGGAACAAGCGAGA A A^ A A U C ---- CAGAUUAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Mir-6012_5p |
| mirBase accession | None |
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| Sequence |
0- AGGCUGACCUCUUCACCUGUGGAAAU -26
Get sequence
|
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| Co-mature sequence |
Bge-Mir-6012_3p |
| mirBase accession | None |
|---|
| Sequence |
45- UUCGGCGAUGAGAUCAGCCAGU -67
Get sequence
|
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