| MirGeneDB ID | Bge-Mir-3770 |
|---|
| Family name |
MIR-3770 (all species) |
|---|
| Seed |
AUCCUGC |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
B. germanica
|
|---|
| Node of Origin (family) |
B. germanica
|
|---|
Genome context
(Bger_2.0) |
KZ614626.1: 48115-48174 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGAACAAUCGAGAAAAUCCACAGUGGGUGAAAUCCUGCAUCAAGUGCGUUGCUUGGAUUUCAAACAGCAACGCUUUGACAGCAGGAAUUUAUCCAUGGUGUAUAUUCGUCAUCUUCUUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGAACAAUCGAGAAAAUC-- A A A-| U UGGAU
CAC GUGGGUGAA UCCUGC UCAAG GCGUUGCU U
GUG UACCUAUUU AGGACG AGUUU CGCAACGA U
UCUUCUUCUACUGCUUAUAU G A AC^ - CAAAC
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | This miRNa locus is also present in hymenopterans. |
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bge-Mir-3770_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAUCCUGCAUCAAGUGCGUUGCU -23
Get sequence
|
|---|
| Star sequence |
Bge-Mir-3770_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CAACGCUUUGACAGCAGGAAUUU -60
Get sequence
|
|---|
