MirGeneDB 2.1
MirGeneDB ID

Bge-Mir-278

Family name MIR-278 (all species)
Seed CGGUGGG
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-278  Bfl-Mir-278  Bla-Mir-278  Cgi-Mir-278  Csc-Mir-278  Cte-Mir-278  Dan-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dsi-Mir-278  Dya-Mir-278  Efe-Mir-278-P1-v1  Efe-Mir-278-P1-v2  Efe-Mir-278-P2  Esc-Mir-278  Hme-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Lpo-Mir-278-P3  Lpo-Mir-278-P4  Lpo-Mir-278-P5  Npo-Mir-278  Obi-Mir-278  Ovu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Sko-Mir-278  Sme-Mir-278  Spu-Mir-278  Xbo-Mir-278 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)		 KZ615041.1: 143304-143363 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUAUGUCUCAUCACUAUUUGGUGGCACAUACGGAUGAUCGUCUCCGCCAACCGUGAAUAUAAUAAGGUCGGUGGGACUUUCGUCCGUUUGGGACACCUUGGAUACAUCUUGAGAAAUAC
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Structure
        10        20          30        40        50          
CAUAUGUCUCAUCACUAUUU--|   GCA  U        UC   U     A   GUGAAU 
                      GGUG   CA ACGGAUGA  GUC CCGCC ACC      \
                      CCAC   GU UGCCUGCU  CAG GGUGG UGG      A
CAUAAAGAGUUCUACAUAGGUU^   AGG  U        UU   -     C   AAUAAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-278_5p*
mirBase accessionNone
Sequence 
0- ACGGAUGAUCGUCUCCGCCAACC -23
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Mature sequence

Bge-Mir-278_3p
mirBase accessionNone
Sequence 
38- UCGGUGGGACUUUCGUCCGUUU -60
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