| MirGeneDB ID | Asu-Mir-86 |
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| Family name |
MIR-86 (all species) |
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| Seed |
AAGUGAA |
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| Species |
Large roundworm (Ascaris suum) |
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| MiRBase ID |
asu-mir-86
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| Paralogues |
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| Orthologues |
Cbr-Mir-86
Cel-Mir-86
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| Node of Origin (locus) |
Chromadorea
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| Node of Origin (family) |
Chromadorea
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Genome context
(ASU_PRJNA80881_plustraces) |
Scaffold576: 325320-325380 [+]
|
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Precursor
(pre-Mir +30nt flank) |
UCCACGGAAAAAUGCAGGUGGCAGGCCAGUUAAGUGAAUGCUUUGCCACAGUCUUAGCAAUGAAAUAAGCUGGGCUGAGGUUCACUUAGGCUGGAGGCUCCAACCAAAGUCAAACCCCAUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCCACGGAAAAAUGCAGGU---| AGG - G U A CUUAGCA
GGC CCAGU UAAGUGAAU CUU GCC CAGU A
UCG GGUCG AUUCACUUG GAG CGG GUCG U
CUACCCCAAACUGAAACCAACC^ GA- G - U - AAUAAAG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| 0h |
11 |
12 |
24 |
46 |
64 |
6d |
7d |
8d |
96 |
Em |
La |
Ov |
Se |
Sp |
Te |
Zy |
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| Mature sequence |
Asu-Mir-86_5p |
| mirBase accession | MIMAT0021479 |
|---|
| Sequence |
0- UAAGUGAAUGCUUUGCCACAGUCU -24
Get sequence
|
|---|
| Star sequence |
Asu-Mir-86_3p* |
| mirBase accession | MIMAT0021480 |
|---|
| Sequence |
39- CUGGGCUGAGGUUCACUUAGGC -61
Get sequence
|
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