| MirGeneDB ID | Asu-Mir-305 |
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| Family name |
MIR-305 (all species) |
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| Seed |
UUGUACU |
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| Species |
Large roundworm (Ascaris suum) |
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| MiRBase ID |
asu-mir-239
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| Paralogues |
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| Orthologues |
Aae-Mir-305
Bge-Mir-305
Cbr-Mir-305-P1
Cbr-Mir-305-P2
Cbr-Mir-305-P3
Cel-Mir-305-P1
Cel-Mir-305-P2
Csc-Mir-305
Dan-Mir-305
Dma-Mir-305
Dme-Mir-305
Dmo-Mir-305
Dpu-Mir-305
Dsi-Mir-305
Dya-Mir-305
Hme-Mir-305
Isc-Mir-305
Lpo-Mir-305-P4
Lpo-Mir-305-P5
Lpo-Mir-305-P6
Lpo-Mir-305-P7
Lpo-Mir-305-P8
Tca-Mir-305
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| Node of Origin (locus) |
Ecdysozoa
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| Node of Origin (family) |
Ecdysozoa
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Genome context
(ASU_PRJNA80881_plustraces) |
Scaffold465: 140784-140842 [+]
|
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Precursor
(pre-Mir +30nt flank) |
UGGGUGUGGUUGAUUGCCAGCUUGUUGAACUUUGUACUUCGGCUAAGGUGCUGCUCUAUGGCGGCCAGUACCUUGGCUAGGUGCAACGCUGAAUAGUUGGCUUCGAUAGUGAUGCGGCG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGGGUGUGGUUGAUUGC---| UGUUGAACU C CUCUA
CAGCU UUGUACUU GGCUAAGGUGCUG U
GUUGA AACGUGGA UCGGUUCCAUGAC G
GCGGCGUAGUGAUAGCUUCG^ UAAGUCGC- - CGGCG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| 0h |
11 |
12 |
24 |
46 |
64 |
6d |
7d |
8d |
96 |
Em |
La |
Ov |
Se |
Sp |
Te |
Zy |
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| Mature sequence |
Asu-Mir-305_5p |
| mirBase accession | MIMAT0021521 |
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| Sequence |
0- UUUGUACUUCGGCUAAGGUGCUG -23
Get sequence
|
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| Star sequence |
Asu-Mir-305_3p* |
| mirBase accession | MIMAT0021522 |
|---|
| Sequence |
38- UACCUUGGCUAGGUGCAACGC -59
Get sequence
|
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