Mir-150

MirGeneDB ID

Aca-Mir-150

Family name

MIR-150 (all species)

Seed

CUCCCAA

Species

Green anole lizard (Anolis carolinensis)

MiRBase ID

aca-mir-150

Paralogues

Orthologues

Ami-Mir-150 Bta-Mir-150 Cfa-Mir-150 Cmi-Mir-150 Cpo-Mir-150 Dno-Mir-150 Dre-Mir-150 Ete-Mir-150 Gja-Mir-150 Gmo-Mir-150 Hsa-Mir-150 Lch-Mir-150 Loc-Mir-150 Mal-Mir-150 Mdo-Mir-150 Mml-Mir-150 Mmu-Mir-150 Mun-Mir-150 Oan-Mir-150 Ocu-Mir-150 Pbv-Mir-150 Rno-Mir-150 Sha-Mir-150 Spt-Mir-150 Sto-Mir-150 Tni-Mir-150 Xla-Mir-150-P1 Xla-Mir-150-P2 Xtr-Mir-150

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Gnathostomata

Genome context
(anoCar2)

6: 80358830-80358889 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GAAAGGAAUAUACAAAACUCUCUUUCCCUCUCUCCCAACCCUUGUACCAGUGCCAACUGUAGUCCUCACUGGUACAGAGGAUGGAAGGGUGGGCCUGCAGAGAUGAGACACACCUGGAAC

Get precursor sequence

Structure

        10         20         30        40        50         
GAAAGGAAUAUACAAAA-    CUUU-|  U    C   A  C           CCAACU 
                  CUCU     CCC CUCU CCA CC UUGUACCAGUG      G
                  GAGA     GGG GGGA GGU GG GACAUGGUCAC      U
CAAGGUCCACACAGAGUA    CGUCC^  U    A   A  A           UCCUGA 
.       110       100        90        80        70        60