MirGeneDB ID | Aae-Mir-10-P4 |
Family name |
MIR-10 (all species) |
Seed |
ACCCUGU |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-993
|
Paralogues |
Aae-Mir-10-P1-v1
Aae-Mir-10-P1-v2
Aae-Mir-10-P2
Aae-Mir-10-P3
|
Orthologues |
Asu-Mir-10-P4
Bge-Mir-10-P4
Bpl-Mir-10-P4
Csc-Mir-10-P4q
Csc-Mir-10-P4r
Cte-Mir-10-P4
Dan-Mir-10-P4
Dma-Mir-10-P4
Dme-Mir-10-P4
Dmo-Mir-10-P4
Dpu-Mir-10-P4
Dsi-Mir-10-P4
Dya-Mir-10-P4
Efe-Mir-10-P4a
Efe-Mir-10-P4b
Efe-Mir-10-P4c
Hme-Mir-10-P4
Isc-Mir-10-P4
Lan-Mir-10-P4d
Lan-Mir-10-P4e
Lpo-Mir-10-P4j
Lpo-Mir-10-P4k
Lpo-Mir-10-P4l
Lpo-Mir-10-P4m
Lpo-Mir-10-P4n
Nve-Mir-10
Tca-Mir-10-P4
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Eumetazoa
|
Genome context (Aaeg_L3) |
supercont1.1056: 256798-256871 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAUCAAACGCACUAGCGCUCCUCCGUGACCUACCCUGUAGUUCCGGGCUUUUGUGGUUUCUUUUAUUGUUAAUUAUCAGAAGCUCGUUUCUAUAGAGGUAUCUCACAGGGUGAACAAUCUUCAAAACGAUAAAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UAUCAAACGCACUAGCGC--- - C CC -| UUC UGGUUUCUUUU
UC CUC GUGA UACC CUGUAG CGGGCUUUUG \
AG GGG CACU AUGG GAUAUC GCUCGAAGAC A
AAAAUAGCAAAACUUCUAACA U A CU A^ UUU UAUUAAUUGUU
130 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Aae-Mir-10-P4_5p |
mirBase accession | MIMAT0014266 |
Sequence |
0- UACCCUGUAGUUCCGGGCUUUUGUG -25
Get sequence
|
Co-mature sequence |
Aae-Mir-10-P4_3p |
mirBase accession | None |
Sequence |
48- GAAGCUCGUUUCUAUAGAGGUAUCUC -74
Get sequence
|