MirGeneDB

80 Lottia gigantea microRNA genes
Sort by genome coordinates Motifs Tissue expression
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Gene name MiRBase ID Family 5p accession 3p accession Chromosome Start End Strand Node of origin (gene) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Lgi-Bantam None BANTAM None None sca_212 233725 233783 + Protostomia Protostomia No
Lgi-Let-7 lgi-let-7 LET-7 MIMAT0009604 None sca_16 2791971 2792038 - Bilateria Bilateria No 1
Lgi-Mir-1 lgi-mir-1 MIR-1 None MIMAT0009557 sca_1 5198467 5198526 - Bilateria Bilateria No 1
Lgi-Mir-2-o14 lgi-mir-2d MIR-2 None MIMAT0009559 sca_2 4520084 4520140 + Gastropoda Protostomia No 1
Lgi-Mir-2-o26 lgi-mir-2c MIR-2 None MIMAT0009558 sca_2 5780837 5780893 + L. gigantea Protostomia No 1
Lgi-Mir-2-o27a lgi-mir-2d MIR-2 None MIMAT0009559 sca_2 4514963 4515021 - L. gigantea Protostomia No 1
Lgi-Mir-2-o27b lgi-mir-2d MIR-2 None MIMAT0009559 sca_2 4515158 4515216 - L. gigantea Protostomia No
Lgi-Mir-7 lgi-mir-7 MIR-7 MIMAT0009560 None sca_35 2110252 2110314 - Bilateria Bilateria Unknown 1
Lgi-Mir-8 lgi-mir-8 MIR-8 None MIMAT0009561 sca_4 826439 826500 + Bilateria Bilateria No 1
Lgi-Mir-9 lgi-mir-9 MIR-9 MIMAT0009562 MIMAT0009572 sca_14 1751428 1751489 + Bilateria Bilateria No 1
Lgi-Mir-10-P1 lgi-mir-10 MIR-10 MIMAT0009563 None sca_12 2577679 2577737 - Bilateria Eumetazoa Unknown 1
Lgi-Mir-10-P2 lgi-mir-100 MIR-10 MIMAT0009577 None sca_16 2793582 2793638 - Bilateria Eumetazoa Unknown 1
Lgi-Mir-10-P3 None MIR-10 None None sca_16 2784872 2784923 - Bilateria Eumetazoa Unknown
Lgi-Mir-10-P5 None MIR-10 None None sca_12 2736439 2736501 - Neotrochozoa Eumetazoa Unknown 1 1
Lgi-Mir-10-P6 lgi-mir-1991 MIR-10 MIMAT0009733 None sca_12 2881809 2881870 - Neotrochozoa Eumetazoa No 1
Lgi-Mir-12 lgi-mir-12 MIR-12 MIMAT0009564 None sca_22 809271 809328 + Protostomia Protostomia Unknown 1 1
Lgi-Mir-22-P1 lgi-mir-745a MIR-22 None MIMAT0009598 sca_20 381451 381510 + Bilateria Bilateria No 1
Lgi-Mir-22-P2 lgi-mir-745b MIR-22 None MIMAT0009599 sca_20 382169 382227 + Bilateria Bilateria No 1
Lgi-Mir-29-P1 lgi-mir-29 MIR-29 None MIMAT0009565 sca_4 3136225 3136282 + Bilateria Bilateria No 1
Lgi-Mir-31 lgi-mir-31 MIR-31 MIMAT0009566 None sca_62 866087 866148 - Bilateria Bilateria Unknown 1
Lgi-Mir-33 lgi-mir-33 MIR-33 MIMAT0009567 MIMAT0009568 sca_111 788865 788923 + Bilateria Bilateria Unknown 1
Lgi-Mir-34 lgi-mir-34 MIR-34 MIMAT0009569 None sca_10 1151274 1151332 + Bilateria Bilateria Unknown 1 1
Lgi-Mir-67 lgi-mir-67 MIR-67 None MIMAT0009570 sca_139 406874 406933 + Protostomia Protostomia Yes 1
Lgi-Mir-71 lgi-mir-71 MIR-71 MIMAT0009571 None sca_2 4515804 4515862 - Bilateria Bilateria Unknown 1
Lgi-Mir-76 lgi-mir-981 MIR-76 None MIMAT0009601 sca_42 846613 846673 + Bilateria Bilateria No 1
Lgi-Mir-87 lgi-mir-87 MIR-87 None MIMAT0009573 sca_160 256830 256887 + Protostomia Protostomia No 1
Lgi-Mir-92-o27-v1 lgi-mir-92 MIR-92 None MIMAT0009574 sca_47 43373 43430 - L. gigantea Bilateria No 1
Lgi-Mir-92-o27-v2 lgi-mir-92 MIR-92 None MIMAT0009574 sca_47 43373 43430 - L. gigantea Bilateria No 1
Lgi-Mir-92-o28 lgi-mir-92 MIR-92 None MIMAT0009574 sca_47 43039 43096 - L. gigantea Bilateria No
Lgi-Mir-92-o29 lgi-mir-92 MIR-92 None MIMAT0009574 sca_47 43249 43304 - L. gigantea Bilateria No 1
Lgi-Mir-92-o30 lgi-mir-92 MIR-92 None MIMAT0009574 sca_47 46552 46607 - L. gigantea Bilateria No 1
Lgi-Mir-96-P1a lgi-mir-96a MIR-96 MIMAT0009575 None sca_31 795528 795586 + Mollusca Bilateria Unknown 1
Lgi-Mir-96-P1b lgi-mir-96b MIR-96 MIMAT0009576 None sca_112 69886 69944 + Mollusca Bilateria Unknown 1
Lgi-Mir-96-P2 lgi-mir-182 MIR-96 MIMAT0009583 None sca_71 757688 757745 + Bilateria Bilateria Unknown 1
Lgi-Mir-96-P3 lgi-mir-183 MIR-96 MIMAT0009584 None sca_71 756862 756922 + Bilateria Bilateria Unknown 1 1
Lgi-Mir-124-P10 lgi-mir-124 MIR-124 None MIMAT0009578 sca_15 2554528 2554585 + L. gigantea Bilateria No 1 1
Lgi-Mir-124-P11 None MIR-124 None None sca_15 2557525 2557581 + L. gigantea Bilateria No 1
Lgi-Mir-133 lgi-mir-133 MIR-133 MIMAT0009579 MIMAT0009580 sca_1 5190441 5190503 - Bilateria Bilateria No 1
Lgi-Mir-137 lgi-mir-137 MIR-137 None MIMAT0009581 sca_112 765709 765768 + Bilateria Bilateria Unknown 1
Lgi-Mir-153 lgi-mir-153 MIR-153 None MIMAT0009582 934768777_BGOB62773 183 240 + Bilateria Bilateria No 1 1
Lgi-Mir-184-P5 lgi-mir-184 MIR-184 None MIMAT0009585 sca_131 549624 549681 - L. gigantea Bilateria No 1
Lgi-Mir-184-P6 None MIR-184 None None sca_131 549297 549354 - L. gigantea Bilateria No 1
Lgi-Mir-190-v1 lgi-mir-190 MIR-190 MIMAT0009586 None sca_47 52951 53013 - Bilateria Bilateria Unknown 1 1
Lgi-Mir-190-v2 lgi-mir-190 MIR-190 MIMAT0009586 None sca_47 52951 53012 - Bilateria Bilateria Unknown 1
Lgi-Mir-193-P1 lgi-mir-193 MIR-193 None MIMAT0009587 sca_31 1568891 1568950 + Bilateria Bilateria No
Lgi-Mir-193-P2 None MIR-193 None None sca_31 1573998 1574056 + Bilateria Bilateria Yes 1
Lgi-Mir-210 None MIR-210 None None sca_145 563724 563779 - Bilateria Bilateria No 1
Lgi-Mir-216-P1 lgi-mir-216a MIR-216 MIMAT0009588 None sca_22 807335 807401 + Bilateria Bilateria No 1
Lgi-Mir-216-P2 lgi-mir-216b MIR-216 MIMAT0009589 None sca_22 805723 805780 + Bilateria Bilateria Unknown 1
Lgi-Mir-242-P1 lgi-mir-242a MIR-242 MIMAT0009590 None sca_16 1142666 1142720 - L. gigantea Bilateria Unknown 1
Lgi-Mir-242-P2 lgi-mir-242b MIR-242 MIMAT0009681 None sca_16 1142985 1143041 - L. gigantea Bilateria Unknown
Lgi-Mir-252-P1 lgi-mir-252a MIR-252 MIMAT0009591 None sca_150 483957 484016 - Bilateria Bilateria Unknown 1
Lgi-Mir-252-P2 lgi-mir-252b MIR-252 MIMAT0009682 None sca_150 486133 486191 - Bilateria Bilateria Unknown 1
Lgi-Mir-277 None MIR-277 None None sca_10 1145805 1145865 + Protostomia Protostomia No 1 1
Lgi-Mir-278 lgi-mir-278 MIR-278 None MIMAT0009592 sca_76 543736 543792 + Bilateria Bilateria No 1
Lgi-Mir-279 lgi-mir-279 MIR-279 None MIMAT0009593 sca_70 133228 133287 - Protostomia Protostomia No 1
Lgi-Mir-281-P8 lgi-mir-281 MIR-281 MIMAT0009594 MIMAT0009595 sca_7 1082934 1082990 + L. gigantea Bilateria No 1
Lgi-Mir-281-P9 lgi-mir-281 MIR-281 MIMAT0009594 MIMAT0009595 sca_7 642928 642984 - L. gigantea Bilateria No 1
Lgi-Mir-315 lgi-mir-315 MIR-315 MIMAT0009596 None sca_791 650 711 - Bilateria Bilateria Unknown 1
Lgi-Mir-317 lgi-mir-317 MIR-317 None MIMAT0009597 sca_10 851891 851951 + Protostomia Protostomia No 1
Lgi-Mir-375 lgi-mir-375 MIR-375 None MIMAT0009676 sca_118 35413 35471 + Bilateria Bilateria No 1
Lgi-Mir-750 lgi-mir-750 MIR-750 None MIMAT0009600 sca_236 113228 113290 + Protostomia Protostomia No
Lgi-Mir-1175 lgi-mir-1175 MIR-1175 MIMAT0009602 MIMAT0009603 sca_236 116361 116422 + Protostomia Protostomia No 1
Lgi-Mir-1984 lgi-mir-1984 MIR-1984 MIMAT0009726 None sca_4 4879135 4879195 + Mollusca Mollusca Unknown 1 1
Lgi-Mir-1985 lgi-mir-1985 MIR-1985 MIMAT0009727 None sca_4 4881330 4881387 + Mollusca Mollusca Unknown 1
Lgi-Mir-1986 lgi-mir-1986 MIR-1986 None MIMAT0009728 sca_39 81755 81811 - Neotrochozoa Neotrochozoa No 1
Lgi-Mir-1988 lgi-mir-1988 MIR-1988 MIMAT0009729 None sca_162 318652 318708 + Gastropoda Gastropoda No 1
Lgi-Mir-1989 lgi-mir-1989 MIR-1989 MIMAT0009730 None sca_2 5468355 5468415 - Lophotrochozoa Lophotrochozoa No 1
Lgi-Mir-1990 lgi-mir-1990 MIR-1990 MIMAT0009732 None sca_39 82026 82079 - Neotrochozoa Neotrochozoa Unknown 1
Lgi-Mir-1992-P1 lgi-mir-1992 MIR-1992 None MIMAT0009722 sca_253 35945 36002 - Lophotrochozoa Lophotrochozoa No 1
Lgi-Mir-1992-P2 None MIR-1992 None None sca_253 36542 36604 - Lophotrochozoa Lophotrochozoa No 1
Lgi-Mir-1993 lgi-mir-1993 MIR-1993 None MIMAT0009723 sca_1 2120424 2120483 + Protostomia Protostomia No 1
Lgi-Mir-1994-P1 lgi-mir-1994a MIR-1994 None MIMAT0009724 sca_4 5290040 5290099 + Mollusca Neotrochozoa Unknown 1
Lgi-Mir-1994-P2 lgi-mir-1994b MIR-1994 None MIMAT0009725 sca_4 5290321 5290377 + Mollusca Neotrochozoa No 1
Lgi-Mir-2001 lgi-mir-2001 MIR-2001 MIMAT0009731 None sca_150 486301 486357 - Bilateria Bilateria No 1
Lgi-Mir-2722 lgi-mir-2722 MIR-2722 None MIMAT0013589 955868772_BGOB50479 333 388 - Mollusca Mollusca No 1 1
Lgi-Novel-1 None LGI-NOVEL-1 None None sca_115 803487 803546 - L. gigantea L. gigantea No 1
Lgi-Novel-2 None LGI-NOVEL-2 None None sca_13 796803 796862 - L. gigantea L. gigantea No 1 1
Lgi-Novel-3-P1 None LGI-NOVEL-3 None None sca_95 478396 478454 + L. gigantea L. gigantea No 1
Lgi-Novel-3-P2 None LGI-NOVEL-3 None None sca_95 480768 480826 + L. gigantea L. gigantea No 1

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Get genome coordinates (GFF format)