MirGeneDB

102 Capitella teleta microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Cte-Bantam cte-bantam BANTAM GAGAUCA None MIMAT0009551 CAPTEscaffold_114 319164 319225 + Protostomia Protostomia No
Cte-Let-7 cte-let-7 LET-7 GAGGUAG MIMAT0009552 None CAPTEscaffold_135 267314 267381 + Bilateria Bilateria Unknown 1
Cte-Mir-1 cte-mir-1 MIR-1 GGAAUGU None MIMAT0009502 CAPTEscaffold_274 105952 106014 - Bilateria Bilateria No
Cte-Mir-2-o36 cte-mir-2a MIR-2 AUCACAG None MIMAT0009503 CAPTEscaffold_933 10541 10616 + C. teleta Protostomia No 1
Cte-Mir-2-o37 cte-mir-2b MIR-2 CACAGCC None MIMAT0009504 CAPTEscaffold_933 10045 10113 + C. teleta Protostomia No 1
Cte-Mir-2-o38 cte-mir-2c MIR-2 AUCACAG None MIMAT0009505 CAPTEscaffold_933 10413 10471 + C. teleta Protostomia No 1
Cte-Mir-2-o39 cte-mir-2d-1 MIR-2 AUCACAG None MIMAT0009678 CAPTEscaffold_36111 1054 1112 + C. teleta Protostomia No 1 1
Cte-Mir-2-o40 cte-mir-2e-1 MIR-2 AUCACAG None MIMAT0013527 CAPTEscaffold_876 29359 29419 - C. teleta Protostomia No 1
Cte-Mir-2-o41 cte-mir-2f MIR-2 AUCACAG None MIMAT0013528 CAPTEscaffold_876 28955 29017 - C. teleta Protostomia No 1
Cte-Mir-2-o42 cte-mir-2g MIR-2 AUCACAG None MIMAT0013559 CAPTEscaffold_933 10173 10226 + C. teleta Protostomia No 1
Cte-Mir-2-o43 cte-mir-2709 MIR-2 AUCACAG MIMAT0013578 None CAPTEscaffold_876 29085 29145 - C. teleta Protostomia No 1
Cte-Mir-7 cte-mir-7 MIR-7 GGAAGAC MIMAT0009506 None CAPTEscaffold_85 61656 61717 + Bilateria Bilateria Unknown 1
Cte-Mir-8 cte-mir-8 MIR-8 AAUACUG None MIMAT0009507 CAPTEscaffold_548 60524 60584 + Bilateria Bilateria No 1
Cte-Mir-9 cte-mir-9 MIR-9 CUUUGGU MIMAT0009508 MIMAT0009554 CAPTEscaffold_250 129678 129738 + Bilateria Bilateria Unknown 1
Cte-Mir-10-P1 cte-mir-10a MIR-10 ACCCUGU MIMAT0009509 None CAPTEscaffold_70 265131 265196 - Bilateria Eumetazoa Unknown 1
Cte-Mir-10-P2 cte-mir-100 MIR-10 ACCCGUA MIMAT0009524 None CAPTEscaffold_135 267093 267153 + Bilateria Eumetazoa Yes 1
Cte-Mir-10-P3 cte-mir-125 MIR-10 CCCUGAG MIMAT0009525 None CAPTEscaffold_135 290568 290628 + Bilateria Eumetazoa No 1
Cte-Mir-10-P4 cte-mir-993 MIR-10 GAAGCUC None MIMAT0013529 CAPTEscaffold_70 218590 218651 + Protostomia Eumetazoa No 1
Cte-Mir-10-P5 cte-mir-10b MIR-10 UACCCUG MIMAT0009510 None CAPTEscaffold_70 411688 411746 - Lophotrochozoa Eumetazoa Unknown 1 1
Cte-Mir-10-P6 cte-mir-1991 MIR-10 UACCCUG MIMAT0013551 None CAPTEscaffold_292 57243 57305 - Lophotrochozoa Eumetazoa Unknown 1
Cte-Mir-10-P7 cte-mir-10c MIR-10 ACCCUGU MIMAT0009511 None CAPTEscaffold_70 317880 317941 - Annelida Eumetazoa No 1
Cte-Mir-12 cte-mir-12 MIR-12 GAGUAUU MIMAT0009512 None CAPTEscaffold_192 33843 33902 - Protostomia Protostomia Unknown 1 1
Cte-Mir-22-P1 cte-mir-745a MIR-22 GCUGCCU None MIMAT0009545 CAPTEscaffold_133 228398 228455 + Bilateria Bilateria No 1
Cte-Mir-22-P2 cte-mir-745b MIR-22 AGCUGCC None MIMAT0009546 CAPTEscaffold_133 228627 228683 + Bilateria Bilateria No 1
Cte-Mir-29-P1 cte-mir-29a MIR-29 AGCACCA None MIMAT0009513 CAPTEscaffold_794 6889 6954 - Bilateria Bilateria No 1 1
Cte-Mir-29-P2 cte-mir-29b MIR-29 AGCACCA None MIMAT0009514 CAPTEscaffold_794 7597 7665 - Bilateria Bilateria No 1 1
Cte-Mir-31 cte-mir-31 MIR-31 GGCAAGA MIMAT0009515 None CAPTEscaffold_43 86484 86544 - Bilateria Bilateria Unknown 1
Cte-Mir-33 cte-mir-33 MIR-33 UGCAUUG MIMAT0009553 None CAPTEscaffold_91 237768 237827 - Bilateria Bilateria Unknown 1
Cte-Mir-34 cte-mir-34 MIR-34 GGCAGUG MIMAT0009516 None CAPTEscaffold_114 443343 443404 - Bilateria Bilateria Unknown 1 1
Cte-Mir-36 cte-mir-36 MIR-36 CACCGGG None MIMAT0013530 CAPTEscaffold_19 701730 701789 - Protostomia Protostomia No 1
Cte-Mir-67 cte-mir-67 MIR-67 CACAACC None MIMAT0009675 CAPTEscaffold_664 25476 25536 + Protostomia Protostomia No 1 1
Cte-Mir-71 cte-mir-71 MIR-71 GAAAGAC MIMAT0009517 None CAPTEscaffold_933 9934 9996 + Bilateria Bilateria No
Cte-Mir-76 cte-mir-981 MIR-76 UCGUUGU None MIMAT0009548 CAPTEscaffold_84 33972 34034 + Bilateria Bilateria No 1
Cte-Mir-87-o9 cte-mir-87a MIR-87 UGAGCAA None MIMAT0009518 CAPTEscaffold_222 219067 219151 - C. teleta Protostomia No 1
Cte-Mir-87-o10 cte-mir-87b MIR-87 UGAGCAA None MIMAT0009519 CAPTEscaffold_222 219605 219665 - C. teleta Protostomia No 1
Cte-Mir-92-o35 cte-mir-92a MIR-92 AUUGCAC None MIMAT0009520 CAPTEscaffold_14 594348 594403 - C. teleta Bilateria No 1 1
Cte-Mir-92-o36 cte-mir-92b MIR-92 AUUGCAC None MIMAT0009521 CAPTEscaffold_14 595238 595297 - C. teleta Bilateria No
Cte-Mir-92-o37 cte-mir-92c MIR-92 AUUGCAC None MIMAT0009522 CAPTEscaffold_14 594225 594286 - C. teleta Bilateria No 1
Cte-Mir-96-P1 cte-mir-96 MIR-96 UUGGCAC MIMAT0009523 None CAPTEscaffold_181 4334 4396 + Bilateria Bilateria Unknown 1 1
Cte-Mir-96-P2 cte-mir-263 MIR-96 UUGGCAC MIMAT0009529 None CAPTEscaffold_522 115197 115256 - Bilateria Bilateria Unknown 1
Cte-Mir-124 cte-mir-124 MIR-124 AAGGCAC None MIMAT0009555 CAPTEscaffold_156 154734 154791 + Bilateria Bilateria Unknown 1 1
Cte-Mir-133 cte-mir-133 MIR-133 UGGUCCC None MIMAT0009526 CAPTEscaffold_274 99094 99159 - Bilateria Bilateria No 1 1
Cte-Mir-137 cte-mir-137 MIR-137 AUUGCUU None MIMAT0009527 CAPTEscaffold_130 173761 173821 + Bilateria Bilateria No 1
Cte-Mir-153 cte-mir-153 MIR-153 UGCAUAG None MIMAT0009528 CAPTEscaffold_2 539891 539950 - Bilateria Bilateria No 1 1
Cte-Mir-184-P3 cte-mir-184a MIR-184 GGACGGA None MIMAT0009530 CAPTEscaffold_291 120205 120266 + C. teleta Bilateria No 1
Cte-Mir-184-P4 cte-mir-184b MIR-184 GGACGGA None MIMAT0009531 CAPTEscaffold_291 120376 120436 + C. teleta Bilateria No 1
Cte-Mir-190 cte-mir-190 MIR-190 GAUAUGU MIMAT0009532 None CAPTEscaffold_291 208586 208646 + Bilateria Bilateria Unknown
Cte-Mir-193-P1 cte-mir-193 MIR-193 ACUGGCC None MIMAT0009533 CAPTEscaffold_127 175298 175355 - Bilateria Bilateria No 1
Cte-Mir-193-P2 cte-mir-365 MIR-193 AAUGCCC None MIMAT0009543 CAPTEscaffold_481 63203 63261 - Bilateria Bilateria No 1
Cte-Mir-210-P5 cte-mir-210a MIR-210 GGUCAUU None MIMAT0009534 CAPTEscaffold_591 19538 19606 - C. teleta Bilateria No 1
Cte-Mir-210-P6 cte-mir-210b MIR-210 UGUGCGU None MIMAT0013572 CAPTEscaffold_591 25368 25430 - C. teleta Bilateria No
Cte-Mir-216-P1c cte-mir-216a MIR-216 AAUCUCA MIMAT0009535 None CAPTEscaffold_192 34755 34815 - C. teleta Bilateria No 1
Cte-Mir-216-P1d cte-mir-216c MIR-216 AAGUUAC None MIMAT0013570 CAPTEscaffold_192 33996 34066 - C. teleta Bilateria No
Cte-Mir-216-P2 cte-mir-216b MIR-216 AAUAUCA MIMAT0009679 None CAPTEscaffold_192 34362 34430 - Bilateria Bilateria Unknown 1
Cte-Mir-219 cte-mir-219 MIR-219 GAUUGUC MIMAT0009556 None CAPTEscaffold_273 18981 19041 + Bilateria Bilateria Unknown 1
Cte-Mir-242 cte-mir-242 MIR-242 UGCGUAG MIMAT0009680 None CAPTEscaffold_453 18518 18578 - Bilateria Bilateria No 1
Cte-Mir-252-P1 cte-mir-252a MIR-252 UAAGUAC MIMAT0009536 None CAPTEscaffold_296 191494 191555 + Bilateria Bilateria Unknown 1
Cte-Mir-252-P2 cte-mir-252b MIR-252 UAAGUAG MIMAT0009537 None CAPTEscaffold_296 190705 190762 + Bilateria Bilateria Unknown 1
Cte-Mir-277-P1 cte-mir-277a MIR-277 AAAUGCA None MIMAT0013531 CAPTEscaffold_114 443887 443966 - C. teleta Protostomia No 1 1
Cte-Mir-277-P2 cte-mir-277b MIR-277 AAAUGCA None MIMAT0013575 CAPTEscaffold_114 443745 443810 - C. teleta Protostomia No 1
Cte-Mir-278 cte-mir-278 MIR-278 CGGUGGG None MIMAT0009538 CAPTEscaffold_296 103173 103248 + Bilateria Bilateria No 1
Cte-Mir-279-o11 cte-mir-279 MIR-279 GACUAGA None MIMAT0009539 CAPTEscaffold_19 703521 703582 - C. teleta Protostomia No 1
Cte-Mir-279-o12 cte-mir-996 MIR-279 GACUAGA None MIMAT0013552 CAPTEscaffold_39 146002 146056 + C. teleta Protostomia No 1 1 1
Cte-Mir-279-o13 cte-mir-2720 MIR-279 GACUAGA MIMAT0013554 MIMAT0013555 CAPTEscaffold_39 146223 146291 + C. teleta Protostomia No 1 1
Cte-Mir-281 cte-mir-281 MIR-281 GUCAUGG None MIMAT0009540 CAPTEscaffold_777 24457 24511 + Bilateria Bilateria No 1
Cte-Mir-315 cte-mir-315 MIR-315 UUUGAUU MIMAT0009541 None CAPTEscaffold_522 128181 128243 - Bilateria Bilateria Unknown 1
Cte-Mir-317 cte-mir-317 MIR-317 GAACACA None MIMAT0009542 CAPTEscaffold_114 444019 444076 - Protostomia Protostomia No 1 1
Cte-Mir-375 cte-mir-375 MIR-375 UUGUUCG None MIMAT0009544 CAPTEscaffold_28 184584 184641 - Bilateria Bilateria No 1 1
Cte-Mir-750 cte-mir-750 MIR-750 CAGAUCU None MIMAT0009547 CAPTEscaffold_910 14366 14434 + Protostomia Protostomia No 1 1
Cte-Mir-1175 cte-mir-1175 MIR-1175 GAGAUUC MIMAT0009549 MIMAT0009550 CAPTEscaffold_910 15451 15510 + Protostomia Protostomia No 1
Cte-Mir-1986 None MIR-1986 GGAUUUC None None CAPTEscaffold_12 607156 607216 + Lophotrochozoa Lophotrochozoa Unknown
Cte-Mir-1987 cte-mir-1987 MIR-1987 CUGCCAG None MIMAT0009703 CAPTEscaffold_122 378005 378063 + Annelida Annelida No 1 1
Cte-Mir-1989 cte-mir-1989 MIR-1989 CAGCUGU MIMAT0009704 None CAPTEscaffold_107 265961 266017 - Lophotrochozoa Lophotrochozoa Unknown 1
Cte-Mir-1990-P1 cte-mir-1990a MIR-1990 GUAAGUU MIMAT0013546 None CAPTEscaffold_12 606811 606875 + Annelida Lophotrochozoa Unknown
Cte-Mir-1990-P2 cte-mir-1990b MIR-1990 AAGUUGA MIMAT0013547 None CAPTEscaffold_12 600050 600112 + Annelida Lophotrochozoa Unknown 1
Cte-Mir-1992 cte-mir-1992 MIR-1992 CAGCAGU None MIMAT0009700 CAPTEscaffold_189 201929 201990 + Lophotrochozoa Lophotrochozoa Yes 1 1
Cte-Mir-1993 cte-mir-1993 MIR-1993 AUUAUGC None MIMAT0009701 CAPTEscaffold_421 174512 174569 + Protostomia Protostomia No 1
Cte-Mir-1994 cte-mir-1994 MIR-1994 GAGACAG None MIMAT0009702 CAPTEscaffold_194 66138 66207 + Lophotrochozoa Lophotrochozoa Unknown 1
Cte-Mir-1995 cte-mir-1995 MIR-1995 UACAUCU MIMAT0009706 None CAPTEscaffold_394 114750 114808 + Annelida Annelida Unknown 1
Cte-Mir-1996 cte-mir-1996a MIR-1996 UCAAGUG MIMAT0009707 None CAPTEscaffold_158 126000 126057 - Annelida Annelida Unknown 1 1
Cte-Mir-1997 cte-mir-1997 MIR-1997 CUGCAGG None MIMAT0009708 CAPTEscaffold_20 24859 24919 + Annelida Annelida No 1
Cte-Mir-1998 cte-mir-1998 MIR-1998 UUGAACG None MIMAT0009709 CAPTEscaffold_24 172651 172724 - Annelida Annelida No
Cte-Mir-2000 cte-mir-2000 MIR-2000 AAGUCUU None MIMAT0009711 CAPTEscaffold_24 172461 172517 - Annelida Annelida No
Cte-Mir-2001 cte-mir-2001 MIR-2001 UUGUGAC MIMAT0009705 None CAPTEscaffold_296 188019 188082 + Bilateria Bilateria No 1 1
Cte-Mir-2685-P1 cte-mir-2685 MIR-2685 AACUCAG MIMAT0013532 MIMAT0013533 CAPTEscaffold_777 8763 8827 - Annelida Annelida No 1
Cte-Mir-2685-P2 cte-mir-2688 MIR-2685 AACUCAG MIMAT0013540 MIMAT0013541 CAPTEscaffold_777 8901 8958 - Annelida Annelida No 1
Cte-Mir-2686-P1 cte-mir-2686a MIR-2686 AGAUGUU MIMAT0013535 MIMAT0013536 CAPTEscaffold_174 220637 220693 + C. teleta Annelida No 1
Cte-Mir-2686-P2 cte-mir-2686b MIR-2686 AGAUGUU None MIMAT0013537 CAPTEscaffold_174 220806 220865 + C. teleta Annelida No 1
Cte-Mir-2686-P3 cte-mir-2686c MIR-2686 AGAUGUU None MIMAT0013538 CAPTEscaffold_174 220483 220549 + C. teleta Annelida No 1
Cte-Mir-2687 cte-mir-2687 MIR-2687 AGGUAGU MIMAT0013539 None CAPTEscaffold_610 82412 82480 - Annelida Annelida Unknown 1
Cte-Mir-2689 cte-mir-2689 MIR-2689 AUCCUGG None MIMAT0013542 CAPTEscaffold_339 64468 64526 - Annelida Annelida No 1
Cte-Mir-2690 cte-mir-2690 MIR-2690 GUGAAAG None MIMAT0013543 CAPTEscaffold_17 567406 567468 - Annelida Annelida No 1
Cte-Mir-2691 cte-mir-2691 MIR-2691 UUUGCAA MIMAT0013544 MIMAT0013545 CAPTEscaffold_558 79813 79879 + Annelida Annelida No 1 1 1
Cte-Mir-2692 cte-mir-2692 MIR-2692 CAGUCAA None MIMAT0013549 CAPTEscaffold_12 600189 600249 + C. teleta C. teleta No 1 1
Cte-Mir-2693 cte-mir-2693 MIR-2693 AGUCUAG None MIMAT0013550 CAPTEscaffold_18 712332 712390 + Annelida Annelida No 1
Cte-Mir-2697 cte-mir-2697 MIR-2697 GCUAUGU MIMAT0013558 None CAPTEscaffold_434 7355 7410 - C. teleta C. teleta No 1
Cte-Mir-2699 cte-mir-2699 MIR-2699 ACGGCCG MIMAT0013561 MIMAT0013562 CAPTEscaffold_300 136643 136700 - C. teleta C. teleta No 1
Cte-Mir-2702 cte-mir-2702 MIR-2702 AUAUUUC MIMAT0013565 MIMAT0013566 CAPTEscaffold_140 52385 52444 - C. teleta C. teleta No 1
Cte-Mir-2703-P1 cte-mir-2703-1 MIR-2703 GCUUUGA MIMAT0013567 MIMAT0013568 CAPTEscaffold_12304 452 509 + C. teleta C. teleta No 1
Cte-Mir-2703-P2 cte-mir-2703-2 MIR-2703 GCUUUGA MIMAT0013567 MIMAT0013568 CAPTEscaffold_394 5014 5071 - C. teleta C. teleta No 1
Cte-Mir-2705 cte-mir-2705 MIR-2705 CUGCAAG None MIMAT0013571 CAPTEscaffold_122 377049 377108 + Annelida Annelida No 1
Cte-Mir-2707 cte-mir-2707 MIR-2707 UACUUAU None MIMAT0013574 CAPTEscaffold_105 375781 375840 - Annelida Annelida No 1 1

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