MirGeneDB 2.1

4 Alligator mississippiensis microRNA genes with seed CUUUGGU (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Ami-Mir-9-P1 ami-mir-9-3 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017713709.1 12355229 12355290 + Gnathostomata Bilateria No 1 1
Ami-Mir-9-P2 ami-mir-9-2 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017707593.1 13620894 13620953 - Gnathostomata Bilateria No 1 1
Ami-Mir-9-P3 ami-mir-9-1 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017709017.1 781222 781283 + Gnathostomata Bilateria No 1 1
Ami-Mir-9-P4 ami-mir-9-4 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038029 NW_017713014.1 4857 4916 + Gnathostomata Bilateria No 1 1 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix