Mir
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2.1
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54 microRNA genes with seed UAGCACC
Sort by genome coordinates
Motifs
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Aca-Mir-29-P1b-v2
aca-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0021914
5
1037469
1037530
-
Gnathostomata
Bilateria
No
1
Ami-Mir-29-P1b-v2
ami-mir-29b-1
MIR-29
UGGUUUC
MIMAT0038074
MIMAT0038075
NW_017709854.1
24298585
24298646
-
Gnathostomata
Bilateria
No
1
Bta-Mir-29-P1b-v2
bta-mir-29b-1
MIR-29
UAGCACC
None
MIMAT0003828
NC_037331.1
94636851
94636912
-
Gnathostomata
Bilateria
No
1
Cfa-Mir-29-P1b-v2
cfa-mir-29b-1
MIR-29
UAGCACC
None
MIMAT0006625
chr14
6184459
6184520
+
Gnathostomata
Bilateria
No
1
Cli-Mir-29-P1b-v2
cli-mir-29b-1
MIR-29
UAGCACC
MIMAT0038449
MIMAT0038450
scaffold137
49406
49467
-
Gnathostomata
Bilateria
No
1
Cpi-Mir-29-P1b-v2
cpi-mir-29b-1
MIR-29
UAGCACC
MIMAT0037671
MIMAT0037672
JH584592
6714641
6714702
-
Gnathostomata
Bilateria
No
1
Cpo-Mir-29-P1b-v2
cpo-mir-29b-1
MIR-29
UAGCACC
MIMAT0046898
MIMAT0046899
scaffold_44
12025790
12025851
+
Gnathostomata
Bilateria
No
1
Dno-Mir-29-P1b-v2
dno-mir-29b-1
MIR-29
UAGCACC
MIMAT0047551
MIMAT0047552
JH569928
229490
229551
-
Gnathostomata
Bilateria
No
1
Ete-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
JH980321
23616622
23616683
-
Gnathostomata
Bilateria
No
Gga-Mir-29-P1b-v2
gga-mir-29b-1
MIR-29
UAGCACC
MIMAT0026488
MIMAT0001097
1
4029396
4029457
+
Gnathostomata
Bilateria
No
1
Gja-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
NW_015176039.1
73859
73920
-
Gnathostomata
Bilateria
No
1
Hsa-Mir-29-P1b-v2
hsa-mir-29b-1
MIR-29
UAGCACC
MIMAT0004514
MIMAT0000100
chr7
130877468
130877529
-
Gnathostomata
Bilateria
No
1
Loc-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
LG8
12632836
12632897
+
Gnathostomata
Bilateria
No
1
Mdo-Mir-29-P1b-v2
mdo-mir-29b-1
MIR-29
UAGCACC
MIMAT0026703
MIMAT0004163
8
190600830
190600891
-
Gnathostomata
Bilateria
No
1
Mml-Mir-29-P1b-v2
mml-mir-29b-1
MIR-29
UAGCACC
MIMAT0026803
MIMAT0006168
chr3
157003744
157003805
-
Gnathostomata
Bilateria
No
1
Mmu-Mir-29-P1b-v2
mmu-mir-29b-1
MIR-29
UAGCACC
MIMAT0004523
MIMAT0000127
chr6
31063026
31063087
-
Gnathostomata
Bilateria
No
1
Oan-Mir-29-P1b-v2
oan-mir-29b-1
MIR-29
UAGCACC
MIMAT0006808
MIMAT0006809
NC_041737.1
47607569
47607630
-
Gnathostomata
Bilateria
No
1
Ocu-Mir-29-P1b-v2
ocu-mir-29b-1
MIR-29
UAGCACC
MIMAT0048145
MIMAT0048146
chr7
9515810
9515871
-
Gnathostomata
Bilateria
No
Pbv-Mir-29-P1b-v2
pbv-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0038869
KE956667.1
9680
9741
-
Gnathostomata
Bilateria
No
1
Rno-Mir-29-P1b-v2
rno-mir-29b-1
MIR-29
UAGCACC
MIMAT0005445
MIMAT0000801
chr4
58344319
58344380
-
Gnathostomata
Bilateria
No
1
Sha-Mir-29-P1b-v2
None
MIR-29
UAGCACC
None
None
GL861655.1
481578
481639
-
Gnathostomata
Bilateria
No
1
Tgu-Mir-29-P1b-v2
tgu-mir-29b-1
MIR-29
UAGCACC
MIMAT0031064
MIMAT0014601
1A
2242422
2242483
+
Gnathostomata
Bilateria
No
1
Xtr-Mir-29-P1b-v2
xtr-mir-29d
MIR-29
UAGCACC
None
MIMAT0003572
chr3
75127549
75127610
-
Gnathostomata
Bilateria
No
1
Mal-Mir-29-P1b1-v2
None
MIR-29
UAGCACC
None
None
KV884739.1
6343654
6343716
-
Clupeocephala
Bilateria
No
1
1
Mal-Mir-29-P1b2-v2
None
MIR-29
UAGCACC
None
None
KV884695.1
2058999
2059059
-
Clupeocephala
Bilateria
No
Aca-Mir-29-P1d-v2
aca-mir-29b-1
MIR-29
UAGCACC
None
MIMAT0021914
GL343255.1
1940196
1940258
+
Gnathostomata
Bilateria
No
1
Ami-Mir-29-P1d-v2
ami-mir-29b-2
MIR-29
UAGCACC
MIMAT0038076
MIMAT0038075
NW_017713418.1
1060964
1061026
+
Gnathostomata
Bilateria
No
1
Cfa-Mir-29-P1d-v2
cfa-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0006625
chr7
6651879
6651941
-
Gnathostomata
Bilateria
No
1
Cli-Mir-29-P1d-v2
cli-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0038450
scaffold454
2208567
2208628
-
Gnathostomata
Bilateria
No
1
Cpi-Mir-29-P1d-v2
cpi-mir-29b-2
MIR-29
UAGCACC
MIMAT0037673
MIMAT0037672
JH584931
90891
90953
-
Gnathostomata
Bilateria
No
1
Cpo-Mir-29-P1d-v2
cpo-mir-29b-2
MIR-29
UAGCACC
MIMAT0046900
MIMAT0046899
scaffold_12
15329414
15329476
+
Gnathostomata
Bilateria
No
1
Dno-Mir-29-P1d-v2
dno-mir-29b-2
MIR-29
UAGCACC
MIMAT0047553
MIMAT0047552
JH570311
1652050
1652112
-
Gnathostomata
Bilateria
No
1
Ete-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
JH980299
34357262
34357324
-
Gnathostomata
Bilateria
No
1
Gga-Mir-29-P1d-v2
gga-mir-29b-2
MIR-29
UAGCACC
MIMAT0031072
MIMAT0001097
26
2700164
2700225
-
Gnathostomata
Bilateria
No
1
Gja-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
NW_015176027.1
130054
130116
-
Gnathostomata
Bilateria
No
1
Hsa-Mir-29-P1d-v2
hsa-mir-29b-2
MIR-29
UAGCACC
MIMAT0004515
MIMAT0000100
chr1
207802451
207802513
-
Gnathostomata
Bilateria
No
1
Mdo-Mir-29-P1d-v2
mdo-mir-29b-2
MIR-29
UAGCACC
MIMAT0031047
MIMAT0004163
2
114184522
114184584
-
Gnathostomata
Bilateria
No
1
Mml-Mir-29-P1d-v2
mml-mir-29b-2
MIR-29
UAGCACC
MIMAT0031079
MIMAT0006168
chr1
158779726
158779788
+
Gnathostomata
Bilateria
No
1
Mmu-Mir-29-P1d-v2
mmu-mir-29b-2
MIR-29
UAGCACC
MIMAT0017063
MIMAT0000127
chr1
195037050
195037112
+
Gnathostomata
Bilateria
No
1
Mun-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
29-P1c-v1_LR594643.1:6972092-6972228
38
100
-
Gnathostomata
Bilateria
No
1
Oan-Mir-29-P1d-v2
oan-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0006809
NC_041734.1
63785638
63785700
-
Gnathostomata
Bilateria
No
1
Ocu-Mir-29-P1d-v2
ocu-mir-29b-2
MIR-29
UAGCACC
MIMAT0048147
MIMAT0048146
chr16
64849792
64849854
+
Gnathostomata
Bilateria
No
1
Pbv-Mir-29-P1d-v2
pbv-mir-29b-1
MIR-29
UAGCACC
MIMAT0038868
MIMAT0038869
KE953855.1
171281
171343
+
Gnathostomata
Bilateria
No
1
Sha-Mir-29-P1d-v2
None
MIR-29
UAGCACC
None
None
GL856780.1
19652
19714
-
Gnathostomata
Bilateria
No
1
Tgu-Mir-29-P1d-v2
tgu-mir-29b-2
MIR-29
UAGCACC
MIMAT0014651
MIMAT0014601
26
1141829
1141890
+
Gnathostomata
Bilateria
No
1
Mal-Mir-29-P1d2-v2
None
MIR-29
UAGCACC
None
None
KV884882.1
159241
159302
-
Clupeocephala
Bilateria
No
1
Rno-Mir-29-P1d5-v2
rno-mir-29b-3
MIR-29
UAGCACC
MIMAT0004717
MIMAT0000801
chr13
113782067
113782129
+
R. norvegicus
Bilateria
No
1
Rno-Mir-29-P1d6-v2
rno-mir-29b-3
MIR-29
UAGCACC
MIMAT0004717
MIMAT0000801
chr1
38238386
38238448
+
R. norvegicus
Bilateria
No
1
Bta-Mir-29-P1d7-v2
bta-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0003828
NC_037343.1
75660384
75660446
+
B. taurus
Bilateria
No
1
Bta-Mir-29-P1d8-v2
bta-mir-29b-2
MIR-29
UAGCACC
None
MIMAT0003828
NC_037343.1
75577056
75577118
+
B. taurus
Bilateria
No
1
Cmi-Mir-29-P2a-v2
None
MIR-29
UAGCACC
None
None
KI635869.1
5937584
5937642
+
Gnathostomata
Bilateria
No
1
Mal-Mir-29-P2b1-v2
None
MIR-29
UAGCACC
None
None
KV884739.1
6343485
6343545
-
Clupeocephala
Bilateria
No
Loc-Mir-29-P2d-v2
None
MIR-29
UAGCACC
None
None
LG3
30969986
30970043
+
Gnathostomata
Bilateria
No
Dpu-Mir-29-P2h
None
MIR-29
UAGCACC
None
None
DAPPUscaffold_32
69280
69354
-
Pancrustacea
Bilateria
No
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