MirGeneDB 2.1

47 microRNA genes with seed UAAAGCU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Bpl-Mir-9 None MIR-9 UAAAGCU None None QEOQ01000508.1 5682168 5682235 - Bilateria Bilateria No
Esc-Mir-9 None MIR-9 CUUUGGU None None Esc-Mir-9_pre_SRIE01047099.1:2251295-2251556 101 162 + Bilateria Bilateria No 1
Npo-Mir-9 None MIR-9 CUUUGGU None None JACATO010000367.1 1247889 1247950 - Bilateria Bilateria Unknown 1
Ovu-Mir-9 None MIR-9 CUUUGGU None None RXHP01026531.1 105328 105389 - Bilateria Bilateria No 1
Pfl-Mir-9-v1 None MIR-9 CUUUGGU None None LD344854.1 129993 130052 + Bilateria Bilateria No 1 1
Sko-Mir-9-v1 sko-mir-9 MIR-9 CUUUGGU MIMAT0009610 MIMAT0009618 NW_003125887.1 164505 164564 - Bilateria Bilateria No 1 1
Hme-Mir-9-o3 hme-mir-79 MIR-9 UAAAGCU None MIMAT0024987 HE669612 9693 9752 - H. melpomene Bilateria No
Hme-Mir-9-o4 None MIR-9 UAAAGCU None None HE671859 114241 114299 - H. melpomene Bilateria No 1
Tca-Mir-9-o7 tca-mir-9b MIR-9 UUUGGUA MIMAT0019134 MIMAT0019135 KQ972687 113154 113211 - T. castaneum Bilateria No 1
Tca-Mir-9-o9-v1 tca-mir-9d MIR-9 UAAAGCU MIMAT0018748 MIMAT0018749 LG5 7455728 7455787 + T. castaneum Bilateria No 1
Bge-Mir-9-o11-v2 None MIR-9 UUUGGUG None None KZ614731.1 668641 668699 - B. germanica Bilateria No 1
Asu-Mir-9-o18 asu-mir-79 MIR-9 UAAAGCU MIMAT0021472 MIMAT0021473 Scaffold46 2189447 2189505 - A. suum Bilateria No 1 1
Hsa-Mir-9-P1 hsa-mir-9-3 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr15 89368032 89368093 + Gnathostomata Bilateria No 1 1
Mmu-Mir-9-P1 mmu-mir-9-3 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr7 79505279 79505340 + Gnathostomata Bilateria No 1 1
Spt-Mir-9-P1 None MIR-9 CUUUGGU None None QEPC01014402.1 10342911 10342972 - Gnathostomata Bilateria Unknown 1 1
Xla-Mir-9-P1c None MIR-9 CUUUGGU None None NC_030728.1 99731313 99731374 + X. laevis Bilateria No 1 1
Xla-Mir-9-P1d None MIR-9 CUUUGGU None None NC_030729.1 44001647 44001708 - X. laevis Bilateria No 1 1
Hsa-Mir-9-P2 hsa-mir-9-2 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr5 88666865 88666924 - Gnathostomata Bilateria No 1 1
Mmu-Mir-9-P2 mmu-mir-9-2 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr13 83738821 83738880 + Gnathostomata Bilateria No 1 1
Spt-Mir-9-P2 None MIR-9 CUUUGGU None None QEPC01014630.1 2369426 2369485 + Gnathostomata Bilateria Unknown 1 1
Xla-Mir-9-P2c None MIR-9 CUUUGGU None None NC_030724.1 182078649 182078707 + X. laevis Bilateria No 1
Xla-Mir-9-P2d None MIR-9 CUUUGGU None None NC_030725.1 151615023 151615081 + X. laevis Bilateria No 1
Hsa-Mir-9-P3 hsa-mir-9-1 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr1 156420353 156420414 - Gnathostomata Bilateria No 1 1
Mmu-Mir-9-P3 mmu-mir-9-1 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr3 88215613 88215674 + Gnathostomata Bilateria No 1 1
Spt-Mir-9-P3 None MIR-9 CUUUGGU None None QEPC01015423.1 5228264 5228325 + Gnathostomata Bilateria Unknown 1 1
Xla-Mir-9-P3c None MIR-9 CUUUGGU None None NC_030738.1 109009154 109009215 + X. laevis Bilateria No 1 1
Xla-Mir-9-P3d None MIR-9 CUUUGGU None None NC_030739.1 93000179 93000240 + X. laevis Bilateria No 1 1
Spt-Mir-9-P4 None MIR-9 CUUUGGU None None QEPC01010893.1 4822954 4823013 - Gnathostomata Bilateria Unknown 1 1 1
Xla-Mir-9-P4c None MIR-9 CUUUGGU None None NC_030724.1 110894599 110894658 + X. laevis Bilateria No 1 1
Xla-Mir-9-P4d None MIR-9 CUUUGGU None None NW_016694812.1 1485278 1485337 - X. laevis Bilateria No 1 1
Dan-Mir-9-P9 dan-mir-4 MIR-9 UAAAGCU None MIMAT0008427 scaffold_13266 9731536 9731592 + Drosophila Bilateria No 1
Dme-Mir-9-P9 dme-mir-4 MIR-9 UAAAGCU MIMAT0020785 MIMAT0000109 2R 19661300 19661356 - Drosophila Bilateria No 1
Dmo-Mir-9-P9 dmo-mir-4 MIR-9 UAAAGCU None MIMAT0008629 scaffold_6496 20936638 20936694 - Drosophila Bilateria No 1
Dsi-Mir-9-P9 dsi-mir-4 MIR-9 UAAAGCU None MIMAT0008842 2R 16151148 16151204 - Drosophila Bilateria No 1
Dya-Mir-9-P9 dya-mir-4 MIR-9 UAAAGCU None MIMAT0009058 2R 13623927 13623983 + Drosophila Bilateria No 1
Aae-Mir-9-P12-v2 aae-mir-79 MIR-9 UAAAGCU MIMAT0014294 MIMAT0014295 supercont1.785 213278 213337 + Diptera Bilateria No
Dan-Mir-9-P12-v2 dan-mir-79 MIR-9 UAAAGCU None MIMAT0008430 scaffold_12916 15864734 15864795 - Diptera Bilateria No
Dme-Mir-9-P12-v2 dme-mir-79 MIR-9 UAAAGCU MIMAT0020814 MIMAT0000352 2L 16698572 16698634 + Diptera Bilateria No
Dmo-Mir-9-P12-v2 dmo-mir-79 MIR-9 UAAAGCU None MIMAT0008690 scaffold_6500 7202147 7202208 + Diptera Bilateria No 1
Dsi-Mir-9-P12-v2 None MIR-9 UAAAGCU None None 2L 16226326 16226388 + Diptera Bilateria No
Dya-Mir-9-P12-v2 dya-mir-79 MIR-9 UAAAGCU None MIMAT0009124 2R 4404435 4404497 - Diptera Bilateria No
Cbr-Mir-9-P14 cbr-mir-75 MIR-9 UAAAGCU None MIMAT0000484 X 4419753 4419815 - Caenorhabditis Bilateria No
Cel-Mir-9-P14 cel-mir-75 MIR-9 UAAAGCU MIMAT0015108 MIMAT0000047 chrX 2372475 2372534 + Caenorhabditis Bilateria No
Cbr-Mir-9-P15 cbr-mir-79 MIR-9 UAAAGCU None MIMAT0000486 I 1849428 1849490 + Caenorhabditis Bilateria No
Cel-Mir-9-P15 cel-mir-79 MIR-9 UAAAGCU MIMAT0020322 MIMAT0000051 chrI 9332964 9333027 + Caenorhabditis Bilateria No
Sme-Mir-9-P30 sme-mir-79 MIR-9 UAAAGCU MIMAT0012108 MIMAT0003988 NNSW01000017_dd_Smes_g4_17 1530998 1531058 - S. mediterranea Bilateria No 1
Tca-Mir-3893 tca-mir-3893 MIR-3893 UAAAGCU MIMAT0018888 MIMAT0018889 LG5 7457235 7457292 + T. castaneum T. castaneum No 1

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