MirGeneDB 2.1

119 microRNA genes with seed GAUAUGU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Cbr-Mir-62 cbr-mir-62 MIR-62 GAUAUGU None MIMAT0001309 X 14298386 14298443 - Caenorhabditis Caenorhabditis No
Cel-Mir-62 cel-mir-62 MIR-62 GAUAUGU None MIMAT0000034 chrX 12692608 12692665 + Caenorhabditis Caenorhabditis No
Cel-Mir-90 cel-mir-90 MIR-90 GAUAUGU MIMAT0020326 MIMAT0000061 chrIII 8874001 8874069 - Caenorhabditis Caenorhabditis No
Cbr-Mir-90-P1 cbr-mir-90a MIR-90 GAUAUGU None MIMAT0000493 III 14455369 14455431 + C. briggsae Caenorhabditis No
Cbr-Mir-90-P2 cbr-mir-90b MIR-90 GAUAUGU MIMAT0011471 MIMAT0011472 III 14456991 14457056 - C. briggsae Caenorhabditis No
Aae-Mir-190 aae-mir-190 MIR-190 GAUAUGU MIMAT0014243 None supercont1.195 82213 82277 - Bilateria Bilateria No 1
Asu-Mir-190 asu-mir-50 MIR-190 GAUAUGU MIMAT0021461 MIMAT0021462 Scaffold592 443185 443243 - Bilateria Bilateria No 1
Bfl-Mir-190 bfl-mir-190 MIR-190 GAUAUGU MIMAT0009489 None NC_049981.1 1701595 1701653 - Bilateria Bilateria Unknown 1 1
Bge-Mir-190 None MIR-190 GAUAUGU None None KZ615352.1 377439 377498 + Bilateria Bilateria No 1
Bla-Mir-190 None MIR-190 GAUAUGU None None Sc0000166 638482 638540 + Bilateria Bilateria Unknown 1 1
Bpl-Mir-190 None MIR-190 GAUAUGU None None QEOQ01000204.1 1583577 1583655 - Bilateria Bilateria No
Cbr-Mir-190 cbr-mir-50 MIR-190 GAUAUGU MIMAT0000475 None I 2597966 2598032 + Bilateria Bilateria No
Cel-Mir-190 cel-mir-50 MIR-190 GAUAUGU MIMAT0000021 MIMAT0020310 chrI 1738650 1738713 + Bilateria Bilateria No 1
Cgi-Mir-190 None MIR-190 GAUAUGU None None scaffold37128 4976 5037 + Bilateria Bilateria No 1
Cte-Mir-190 cte-mir-190 MIR-190 GAUAUGU MIMAT0009532 None CAPTEscaffold_291 208586 208646 + Bilateria Bilateria Unknown
Dan-Mir-190 None MIR-190 GAUAUGU None None scaffold_13337 8074901 8074963 - Bilateria Bilateria No 1
Dma-Mir-190 None MIR-190 GAUAUGU None None NC_046175.1 13045650 13045714 + Bilateria Bilateria No 1
Dme-Mir-190 dme-mir-190 MIR-190 GAUAUGU MIMAT0005467 MIMAT0020848 3L 8571822 8571884 + Bilateria Bilateria No 1
Dmo-Mir-190 None MIR-190 GAUAUGU None None scaffold_6680 4536936 4536999 + Bilateria Bilateria No 1
Dpu-Mir-190 None MIR-190 GAUAUGU None None DAPPUscaffold_3 1681569 1681633 + Bilateria Bilateria No 1
Dsi-Mir-190 dsi-mir-190 MIR-190 GAUAUGU MIMAT0012449 MIMAT0012450 3L 8354561 8354623 + Bilateria Bilateria No 1
Dya-Mir-190 None MIR-190 GAUAUGU None None 3L 3348687 3348749 - Bilateria Bilateria No 1
Esc-Mir-190 None MIR-190 GAUAUGU None None Esc-Mir-190_pre_SRIE01028772.1:3137280-3137417 38 101 - Bilateria Bilateria No 1 1 1
Hme-Mir-190 hme-mir-190 MIR-190 GAUAUGU MIMAT0024944 None HE671536 265220 265277 - Bilateria Bilateria No 1
Npo-Mir-190 None MIR-190 GAUAUGU None None JACATO010000364.1 464357 464420 + Bilateria Bilateria Unknown 1
Obi-Mir-190 None MIR-190 GAUAUGU None None KQ418919 41709 41773 - Bilateria Bilateria No 1 1
Ovu-Mir-190 None MIR-190 GAUAUGU None None RXHP01018750.1 2765 2829 - Bilateria Bilateria No 1 1
Pfl-Mir-190 None MIR-190 GAUAUGU None None LD356152.1 43344 43402 - Bilateria Bilateria Unknown 1
Pmi-Mir-190 None MIR-190 GAUAUGU None None JH773477.1 52114 52179 - Bilateria Bilateria No 1
Sko-Mir-190 sko-mir-190 MIR-190 GAUAUGU MIMAT0009634 None NW_003115462.1 20263 20322 + Bilateria Bilateria Unknown 1
Tca-Mir-190 tca-mir-190 MIR-190 GAUAUGU MIMAT0008375 MIMAT0019119 LG7 945898 945956 + Bilateria Bilateria No 1 1
Xbo-Mir-190 None MIR-190 GAUAUGU None None 3C-assembly_contig_1876 142884 142942 + Bilateria Bilateria No 1 1
Lgi-Mir-190-v1 lgi-mir-190 MIR-190 GAUAUGU MIMAT0009586 None LOTGIsca_47 52951 53013 - Bilateria Bilateria Unknown 1 1
Pma-Mir-190-o1 pma-mir-190a MIR-190 GAUAUGU MIMAT0019494 None NC_046069.1 19690194 19690256 - P. marinus Bilateria No 1 1
Pma-Mir-190-o2 pma-mir-190b MIR-190 GAUAUGU MIMAT0019495 MIMAT0019496 NC_046081.1 12047776 12047834 + P. marinus Bilateria Unknown 1 1
Pma-Mir-190-o3 None MIR-190 GAUAUGU None None NC_046125.1 1050359 1050420 + P. marinus Bilateria Unknown 1
Aca-Mir-190-P1 aca-mir-190a MIR-190 GAUAUGU MIMAT0021821 MIMAT0021822 GL344433.1 25406 25462 + Gnathostomata Bilateria No 1 1
Ami-Mir-190-P1 ami-mir-190a MIR-190 GAUAUGU MIMAT0038202 MIMAT0038203 NW_017713709.1 29297078 29297136 - Gnathostomata Bilateria No 1 1
Bta-Mir-190-P1 bta-mir-190a MIR-190 GAUAUGU MIMAT0009251 None NC_037337.1 47265570 47265628 - Gnathostomata Bilateria No 1 1
Cfa-Mir-190-P1 cfa-mir-190a MIR-190 GAUAUGU MIMAT0009872 None chr30 27433136 27433194 + Gnathostomata Bilateria No 1 1
Cli-Mir-190-P1 None MIR-190 GAUAUGU None None scaffold87 1114482 1114540 - Gnathostomata Bilateria No 1 1
Cmi-Mir-190-P1 None MIR-190 GAUAUGU None None KI635859.1 7993179 7993236 + Gnathostomata Bilateria No 1 1
Cpi-Mir-190-P1 cpi-mir-190a MIR-190 GAUAUGU MIMAT0037804 None JH584488 7290201 7290259 + Gnathostomata Bilateria No 1 1
Cpo-Mir-190-P1 cpo-mir-190a MIR-190 GAUAUGU MIMAT0047062 MIMAT0047063 scaffold_98 858171 858229 + Gnathostomata Bilateria No 1 1
Dno-Mir-190-P1 dno-mir-190a MIR-190 GAUAUGU MIMAT0047713 MIMAT0047714 JH570268 604979 605036 - Gnathostomata Bilateria No 1 1
Ete-Mir-190-P1 None MIR-190 GAUAUGU None None JH980414 2212759 2212817 - Gnathostomata Bilateria Unknown 1 1
Gga-Mir-190-P1 gga-mir-190a MIR-190 GAUAUGU MIMAT0001155 MIMAT0026525 10 4718420 4718478 - Gnathostomata Bilateria No 1 1
Gja-Mir-190-P1 None MIR-190 GAUAUGU None None NW_015160846.1 381770 381826 + Gnathostomata Bilateria Unknown 1 1
Hsa-Mir-190-P1 hsa-mir-190a MIR-190 GAUAUGU MIMAT0000458 MIMAT0026482 chr15 62823971 62824029 + Gnathostomata Bilateria No 1 1
Lch-Mir-190-P1 None MIR-190 GAUAUGU None None JH126577.1 894888 894946 - Gnathostomata Bilateria Unknown 1 1
Loc-Mir-190-P1 None MIR-190 GAUAUGU None None LG3 52827211 52827269 - Gnathostomata Bilateria No 1 1
Mdo-Mir-190-P1 mdo-mir-190a MIR-190 GAUAUGU MIMAT0012740 MIMAT0026933 1 147980895 147980953 + Gnathostomata Bilateria No 1 1
Mml-Mir-190-P1 mml-mir-190a MIR-190 GAUAUGU MIMAT0002312 MIMAT0026572 chr7 39416833 39416891 + Gnathostomata Bilateria No 1 1
Mmu-Mir-190-P1 mmu-mir-190a MIR-190 GAUAUGU MIMAT0000220 MIMAT0016998 chr9 67236663 67236721 - Gnathostomata Bilateria No 1 1
Mun-Mir-190-P1 None MIR-190 GAUAUGU None None 190-P1_LR594632.1:688830808-688830951 44 101 - Gnathostomata Bilateria No 1 1
Oan-Mir-190-P1 oan-mir-190a MIR-190 GAUAUGU MIMAT0006843 MIMAT0006844 NC_041732.1 50106036 50106094 - Gnathostomata Bilateria No 1 1
Ocu-Mir-190-P1 ocu-mir-190a MIR-190 GAUAUGU MIMAT0048299 MIMAT0048300 chr17 9455162 9455220 - Gnathostomata Bilateria No 1 1
Pbv-Mir-190-P1 pbv-mir-190a MIR-190 GAUAUGU MIMAT0038984 MIMAT0038985 KE953378.1 81899 81955 + Gnathostomata Bilateria Unknown 1 1
Sha-Mir-190-P1 sha-mir-190 MIR-190 GAUAUGU MIMAT0022769 None GL834484.1 2121720 2121778 + Gnathostomata Bilateria No 1 1 1
Spt-Mir-190-P1 None MIR-190 GAUAUGU None None QEPC01007102.1 705397 705455 + Gnathostomata Bilateria Unknown 1 1
Sto-Mir-190-P1 None MIR-190 GAUAUGU None None BFAA01179247.1 261 319 + Gnathostomata Bilateria No 1 1
Tgu-Mir-190-P1 tgu-mir-190 MIR-190 GAUAUGU MIMAT0014589 MIMAT0027015 10 4839692 4839750 - Gnathostomata Bilateria No 1 1
Gmo-Mir-190-P1a gmo-mir-190a-1 MIR-190 GAUAUGU MIMAT0044252 MIMAT0044253 GeneScaffold_3816 322284 322343 + Clupeocephala Bilateria No 1 1
Mal-Mir-190-P1a None MIR-190 GAUAUGU None None KV884698.1 2435126 2435185 + Clupeocephala Bilateria No 1 1
Tni-Mir-190-P1a None MIR-190 GAUAUGU None None 5 2569527 2569586 - Clupeocephala Bilateria No 1 1
Dre-Mir-190-P1b dre-mir-190a MIR-190 GAUAUGU MIMAT0001854 None chr25 33139120 33139178 + Clupeocephala Bilateria No 1 1
Gmo-Mir-190-P1b gmo-mir-190a-2 MIR-190 GAUAUGU MIMAT0046033 MIMAT0044253 GeneScaffold_2011 201824 201882 - Clupeocephala Bilateria No 1 1
Mal-Mir-190-P1b None MIR-190 GAUAUGU None None KV884698.1 2435126 2435185 + Clupeocephala Bilateria No 1 1
Tni-Mir-190-P1b tni-mir-190 MIR-190 GAUAUGU MIMAT0003110 None 13 7312010 7312068 - Clupeocephala Bilateria No 1 1
Rno-Mir-190-P1c rno-mir-190a-1 MIR-190 GAUAUGU MIMAT0000865 MIMAT0017145 chr8 80928179 80928237 + R. norvegicus Bilateria No 1 1
Rno-Mir-190-P1d rno-mir-190a-2 MIR-190 GAUAUGU MIMAT0000865 MIMAT0017145 chr8 73030059 73030117 - R. norvegicus Bilateria No 1 1
Aca-Mir-190-P3 aca-mir-190b MIR-190 GAUAUGU MIMAT0021823 None G889P63465RJ23 337 397 + Gnathostomata Bilateria Unknown 1
Ami-Mir-190-P3 ami-mir-190b MIR-190 GAUAUGU MIMAT0038204 None NW_017707531.1 46115 46175 + Gnathostomata Bilateria Unknown 1
Bta-Mir-190-P3 bta-mir-190b MIR-190 GAUAUGU MIMAT0009252 None NC_037330.1 16316842 16316901 + Gnathostomata Bilateria Unknown 1
Cfa-Mir-190-P3 cfa-mir-190b MIR-190 GAUAUGU MIMAT0009873 None chr7 43037540 43037599 + Gnathostomata Bilateria No 1
Cmi-Mir-190-P3 None MIR-190 GAUAUGU None None AAVX02052302.1 1772 1832 - Gnathostomata Bilateria No 1 1
Cpi-Mir-190-P3 cpi-mir-190b MIR-190 GAUAUGU MIMAT0037805 None JH584431 270742 270802 + Gnathostomata Bilateria Unknown 1
Cpo-Mir-190-P3 cpo-mir-190b MIR-190 GAUAUGU MIMAT0047064 MIMAT0047065 scaffold_10 15118647 15118706 - Gnathostomata Bilateria Unknown 1 1
Dno-Mir-190-P3 dno-mir-190b MIR-190 GAUAUGU MIMAT0047715 MIMAT0047716 JH573913 777841 777898 - Gnathostomata Bilateria Unknown 1 1
Dre-Mir-190-P3 dre-mir-190b MIR-190 GAUAUGU MIMAT0003747 None chr16 17705910 17705973 - Gnathostomata Bilateria No 1 1
Ete-Mir-190-P3 None MIR-190 GAUAUGU None None JH980385 743517 743576 - Gnathostomata Bilateria Unknown 1
Gga-Mir-190-P3 gga-mir-190b MIR-190 GAUAUGU MIMAT0037546 MIMAT0037547 25 2882988 2883047 - Gnathostomata Bilateria No 1
Gja-Mir-190-P3 None MIR-190 GAUAUGU None None NW_015171502.1 162103 162162 - Gnathostomata Bilateria No
Gmo-Mir-190-P3 gmo-mir-190b MIR-190 GAUAUGU MIMAT0044186 MIMAT0044187 GeneScaffold_2326 394111 394176 + Gnathostomata Bilateria Unknown
Hsa-Mir-190-P3 hsa-mir-190b MIR-190 GAUAUGU MIMAT0004929 MIMAT0037332 chr1 154193674 154193733 - Gnathostomata Bilateria No 1 1
Lch-Mir-190-P3 None MIR-190 GAUAUGU None None JH127746.1 45964 46023 + Gnathostomata Bilateria Unknown 1 1
Mal-Mir-190-P3 None MIR-190 GAUAUGU None None KV884772.1 1095637 1095702 - Gnathostomata Bilateria Unknown 1
Mdo-Mir-190-P3 mdo-mir-190b MIR-190 GAUAUGU MIMAT0012756 None 2 188533061 188533120 - Gnathostomata Bilateria Unknown 1
Mml-Mir-190-P3 mml-mir-190b MIR-190 GAUAUGU MIMAT0006222 None chr1 128804081 128804140 - Gnathostomata Bilateria No 1 1
Mmu-Mir-190-P3 mmu-mir-190b MIR-190 GAUAUGU MIMAT0004852 MIMAT0017267 chr3 90070030 90070089 + Gnathostomata Bilateria No 1
Oan-Mir-190-P3 oan-mir-190b MIR-190 GAUAUGU MIMAT0006998 None NC_041753.1 1119984 1120043 + Gnathostomata Bilateria Unknown 1
Ocu-Mir-190-P3 ocu-mir-190b MIR-190 GAUAUGU MIMAT0048301 MIMAT0048302 chr13 38367206 38367265 + Gnathostomata Bilateria Unknown 1 1
Pbv-Mir-190-P3 pbv-mir-190b MIR-190 GAUAUGU MIMAT0038986 None KE954141.1 197449 197510 - Gnathostomata Bilateria Unknown 1
Rno-Mir-190-P3 rno-mir-190b MIR-190 GAUAUGU MIMAT0005302 MIMAT0017298 chr2 189421147 189421206 + Gnathostomata Bilateria No 1 1
Sha-Mir-190-P3 None MIR-190 GAUAUGU None None GL856821.1 1120835 1120894 - Gnathostomata Bilateria Unknown 1
Spt-Mir-190-P3 None MIR-190 GAUAUGU None None QEPC01005523.1 634000 634059 + Gnathostomata Bilateria Unknown 1
Sto-Mir-190-P3 None MIR-190 GAUAUGU None None BFAA01025282.1 4654 4714 + Gnathostomata Bilateria Unknown 1 1
Tgu-Mir-190-P3 None MIR-190 GAUAUGU None None 25 274648 274708 + Gnathostomata Bilateria Unknown 1
Tni-Mir-190-P3 None MIR-190 GAUAUGU None None 8 7791021 7791086 - Gnathostomata Bilateria Unknown 1
Xtr-Mir-190-P3 xtr-mir-190 MIR-190 GAUAUGU MIMAT0025392 None AKAT9956_415224979 345 404 + Gnathostomata Bilateria Unknown 1
Xla-Mir-190-P3a xla-mir-190 MIR-190 GAUAUGU MIMAT0046500 MIMAT0046501 NC_030738.1 117531101 117531160 + X. laevis Bilateria Unknown 1
Xla-Mir-190-P3b None MIR-190 GAUAUGU None None NC_030739.1 97211632 97211691 + X. laevis Bilateria Unknown 1
Ebu-Mir-190-P5 None MIR-190 GAUAUGU None None FYBX02010266.1 1978632 1978695 + E. burgeri Bilateria No 1
Ebu-Mir-190-P6 None MIR-190 GAUAUGU None None FYBX02009649.1 2701665 2701725 + E. burgeri Bilateria No 1 1 1
Lan-Mir-190-P7 None MIR-190 GAUAUGU None None LFEI01000091 310835 310894 + L. anatina Bilateria Unknown 1 1
Lan-Mir-190-P8 None MIR-190 GAUAUGU None None LFEI01001779 12036 12095 - L. anatina Bilateria Unknown 1 1
Efe-Mir-190-P9 None MIR-190 GAUAUGU None None Efet.01.392904 384 443 + E. fetida Bilateria No 1
Efe-Mir-190-P10 None MIR-190 GAUAUGU None None Efet.01.642144 166 228 + E. fetida Bilateria No 1
Efe-Mir-190-P11 None MIR-190 GAUAUGU None None Efet.01.129016 2219 2283 + E. fetida Bilateria No
Efe-Mir-190-P12 None MIR-190 GAUAUGU None None Efet.01.318588 3126 3186 + E. fetida Bilateria No
Lpo-Mir-190-P14 None MIR-190 GAUAUGU None None NW_013666147.1 207188 207248 - L. polyphemus Bilateria Unknown 1
Lpo-Mir-190-P15 None MIR-190 GAUAUGU None None NW_013666901.1 171013 171073 + L. polyphemus Bilateria No 1
Lpo-Mir-190-P16 None MIR-190 GAUAUGU None None NW_013666463.1 88125 88185 + L. polyphemus Bilateria No
Lpo-Mir-190-P17 None MIR-190 GAUAUGU None None NW_013666961.1 156503 156563 + L. polyphemus Bilateria No 1
Csc-Mir-190-P18 None MIR-190 GAUAUGU None None NW_019384336.1 223558 223616 - C. sculpturatus Bilateria Unknown 1
Csc-Mir-190-P19 None MIR-190 GAUAUGU None None NW_019384895.1 258792 258850 + C. sculpturatus Bilateria Unknown 1
Sme-Mir-190-P20 sme-mir-190a MIR-190 GAUAUGU MIMAT0004001 MIMAT0004002 NNSW01000018_dd_Smes_g4_18 365786 365839 + S. mediterranea Bilateria No 1 1
Sme-Mir-190-P21 sme-mir-190b MIR-190 GAUAUGU MIMAT0004003 MIMAT0004004 NNSW01000083_dd_Smes_g4_83 666744 666807 - S. mediterranea Bilateria No 1 1 1
Sme-Mir-190-P22 sme-mir-756 MIR-190 GAUAUGU MIMAT0004023 MIMAT0012127 NNSW01000125_dd_Smes_g4_125 1007325 1007389 + S. mediterranea Bilateria No 1

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