MirGeneDB

117 microRNA genes with node of origin Protostomia
Sort by genome coordinates Motifs
Gene name MiRBase ID Family 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aae-Bantam aae-bantam BANTAM MIMAT0014218 MIMAT0014219 supercont1.49 1579554 1579618 - Protostomia Protostomia No 1
Bge-Bantam None BANTAM None None KZ614636.1 591905 591964 + Protostomia Protostomia No
Cgi-Bantam None BANTAM None None scaffold950 540423 540481 + Protostomia Protostomia No
Cte-Bantam cte-bantam BANTAM None MIMAT0009551 scaffold_114 319164 319225 + Protostomia Protostomia No
Dan-Bantam dan-bantam BANTAM None MIMAT0008409 scaffold_13337 6520601 6520660 - Protostomia Protostomia No
Dme-Bantam dme-bantam BANTAM MIMAT0020823 MIMAT0000365 chr3L 642222 642281 + Protostomia Protostomia No
Dmo-Bantam dmo-bantam BANTAM None MIMAT0008634 scaffold_6680 4143325 4143385 + Protostomia Protostomia No
Dpu-Bantam dpu-bantam BANTAM None MIMAT0012634 DAPPUscaffold_115 370169 370231 + Protostomia Protostomia No
Hme-Bantam hme-bantam BANTAM None MIMAT0024930 HE670669 51613 51673 + Protostomia Protostomia No
Lan-Bantam None BANTAM None None LFEI01000073 143315 143376 + Protostomia Protostomia No 1
Lgi-Bantam None BANTAM None None sca_212 233725 233783 + Protostomia Protostomia No
Tca-Bantam tca-bantam BANTAM MIMAT0019178 MIMAT0010091 LG3 16990366 16990425 + Protostomia Protostomia No
Aae-Mir-10-P4 aae-mir-993 MIR-10 MIMAT0014266 None supercont1.1056 256798 256871 + Protostomia Eumetazoa No
Asu-Mir-10-P4 asu-mir-993 MIR-10 MIMAT0021531 MIMAT0021532 Scaffold426 156003 156060 + Protostomia Eumetazoa No
Bge-Mir-10-P4 None MIR-10 None None KZ614729.1 243285 243350 + Protostomia Eumetazoa No
Cte-Mir-10-P4 cte-mir-993 MIR-10 None MIMAT0013529 scaffold_70 218590 218651 + Protostomia Eumetazoa No 1
Dan-Mir-10-P4 None MIR-10 None None scaffold_13340 5446749 5446840 - Protostomia Eumetazoa No 1
Dme-Mir-10-P4 dme-mir-993 MIR-10 MIMAT0020893 MIMAT0005512 chr3R 6776348 6776439 + Protostomia Eumetazoa No 1
Dmo-Mir-10-P4 None MIR-10 None None scaffold_6540 16546199 16546279 - Protostomia Eumetazoa No 1
Dpu-Mir-10-P4 dpu-mir-993 MIR-10 None MIMAT0012676 DAPPUscaffold_7 282318 282382 + Protostomia Eumetazoa No
Hme-Mir-10-P4 hme-mir-993 MIR-10 None MIMAT0025000 HE667778 86419 86482 + Protostomia Eumetazoa No
Isc-Mir-10-P4 isc-mir-993 MIR-10 None MIMAT0012709 DS891538 3285829 3285894 - Protostomia Eumetazoa No 1
Tca-Mir-10-P4 tca-mir-993 MIR-10 MIMAT0019182 MIMAT0010094 LG2 8499393 8499454 - Protostomia Eumetazoa No
Aae-Mir-12 aae-mir-12 MIR-12 MIMAT0014253 MIMAT0014254 supercont1.68 2720399 2720490 - Protostomia Protostomia No 1
Bge-Mir-12 None MIR-12 None None KZ614411.1 688819 688880 - Protostomia Protostomia No 1 1
Cgi-Mir-12 None MIR-12 None None scaffold1785 68054 68110 - Protostomia Protostomia No 1
Cte-Mir-12 cte-mir-12 MIR-12 MIMAT0009512 None scaffold_192 33843 33902 - Protostomia Protostomia Unknown 1 1
Dan-Mir-12 dan-mir-12 MIR-12 MIMAT0008418 None scaffold_12929 2898590 2898653 - Protostomia Protostomia No 1
Dme-Mir-12 dme-mir-12 MIR-12 MIMAT0000117 MIMAT0020794 chrX 15509479 15509542 + Protostomia Protostomia No 1
Dmo-Mir-12 dmo-mir-12 MIR-12 MIMAT0008630 None scaffold_6359 3259793 3259856 + Protostomia Protostomia No 1
Dpu-Mir-12 dpu-mir-12 MIR-12 MIMAT0012638 None DAPPUscaffold_1 1847845 1847905 - Protostomia Protostomia No 1 1
Hme-Mir-12 hme-mir-12 MIR-12 None MIMAT0024936 HE669534 42572 42850 + Protostomia Protostomia No 1
Isc-Mir-12 isc-mir-12 MIR-12 MIMAT0012684 None DS942119 45760 45819 - Protostomia Protostomia No 1
Lgi-Mir-12 lgi-mir-12 MIR-12 MIMAT0009564 None sca_22 809271 809328 + Protostomia Protostomia Unknown 1 1
Tca-Mir-12 tca-mir-12 MIR-12 MIMAT0008358 MIMAT0019102 LG3 21686059 21686118 - Protostomia Protostomia No 1
Cgi-Mir-36 None MIR-36 None None scaffold43988 9126 9185 - Protostomia Protostomia No 1
Cte-Mir-36 cte-mir-36 MIR-36 None MIMAT0013530 scaffold_19 701730 701789 - Protostomia Protostomia No 1
Dpu-Mir-36 None MIR-36 None None DAPPUscaffold_32 68520 68579 - Protostomia Protostomia No 1
Tca-Mir-36 tca-mir-3791 MIR-36 MIMAT0018882 MIMAT0018883 LG5 7457551 7457607 + Protostomia Protostomia No 1
Aae-Mir-67 aae-mir-307 MIR-67 None MIMAT0014296 supercont1.16 1859430 1859488 - Protostomia Protostomia No
Asu-Mir-67 asu-mir-67 MIR-67 MIMAT0021523 MIMAT0021524 Scaffold214 388322 388383 + Protostomia Protostomia Unknown
Bge-Mir-67 None MIR-67 None None KZ615758.1 42405 42465 - Protostomia Protostomia No 1 1 1
Cbr-Mir-67 cbr-mir-67 MIR-67 None MIMAT0000480 III 4112596 4112663 + Protostomia Protostomia No
Cel-Mir-67 cel-mir-67 MIR-67 MIMAT0020316 MIMAT0000039 chrIII 5931364 5931428 - Protostomia Protostomia No
Cte-Mir-67 cte-mir-67 MIR-67 None MIMAT0009675 scaffold_664 25476 25536 + Protostomia Protostomia No 1 1
Dan-Mir-67 dan-mir-307 MIR-67 None MIMAT0008434 scaffold_13266 12795492 12795557 - Protostomia Protostomia No 1
Dme-Mir-67 dme-mir-307a MIR-67 MIMAT0020832 MIMAT0000398 chr2R 9621261 9621326 - Protostomia Protostomia No 1
Dmo-Mir-67 dmo-mir-307 MIR-67 None MIMAT0008665 scaffold_6496 24271692 24271757 + Protostomia Protostomia No 1
Dpu-Mir-67 dpu-mir-307 MIR-67 None MIMAT0012665 DAPPUscaffold_47 641100 641192 - Protostomia Protostomia No 1
Hme-Mir-67 hme-mir-307 MIR-67 None MIMAT0024976 HE671244 79056 79123 - Protostomia Protostomia No 1 1
Isc-Mir-67 isc-mir-307 MIR-67 None MIMAT0012701 DS911299 1700309 1700372 - Protostomia Protostomia No 1
Lan-Mir-67 None MIR-67 None None LFEI01001053 100933 100993 - Protostomia Protostomia No 1
Lgi-Mir-67 lgi-mir-67 MIR-67 None MIMAT0009570 sca_139 406874 406933 + Protostomia Protostomia Yes 1
Aae-Mir-87 aae-mir-87 MIR-87 None MIMAT0014252 supercont1.360 1010798 1010867 + Protostomia Protostomia No 1 1
Hme-Mir-87 hme-mir-87 MIR-87 None MIMAT0024989 HE668834 53115 53175 + Protostomia Protostomia No
Lgi-Mir-87 lgi-mir-87 MIR-87 None MIMAT0009573 sca_160 256830 256887 + Protostomia Protostomia No 1
Aae-Mir-277 aae-mir-277 MIR-277 MIMAT0014210 MIMAT0014211 supercont1.265 508812 508882 + Protostomia Protostomia No 1
Bge-Mir-277 None MIR-277 None None KZ615986.1 42014 42078 - Protostomia Protostomia No
Cel-Mir-277 cel-mir-232 MIR-277 MIMAT0020777 MIMAT0000287 chrIV 10994184 10994248 - Protostomia Protostomia No
Cgi-Mir-277 None MIR-277 None None scaffold622 474084 474142 + Protostomia Protostomia No 1
Dan-Mir-277 dan-mir-277 MIR-277 None MIMAT0008407 scaffold_13340 6489013 6489076 + Protostomia Protostomia No 1
Dme-Mir-277 dme-mir-277 MIR-277 MIMAT0020804 MIMAT0000338 chr3R 10100039 10100102 + Protostomia Protostomia No 1
Dmo-Mir-277 dmo-mir-277 MIR-277 None MIMAT0008685 scaffold_6540 11885111 11885174 - Protostomia Protostomia No 1
Dpu-Mir-277 None MIR-277 None None DAPPUscaffold_4 1242975 1243041 - Protostomia Protostomia No 1
Efe-Mir-277 None MIR-277 None None Efet.01.213770 120 185 + Protostomia Protostomia No 1
Hme-Mir-277 hme-mir-277 MIR-277 None MIMAT0024959 HE667979 12468 12551 - Protostomia Protostomia No 1
Isc-Mir-277 None MIR-277 None None DS891538 51143 51205 - Protostomia Protostomia No 1
Lgi-Mir-277 None MIR-277 None None sca_10 1145805 1145865 + Protostomia Protostomia No 1 1
Tca-Mir-277 tca-mir-277 MIR-277 MIMAT0019124 MIMAT0008382 LG7 14498469 14498537 + Protostomia Protostomia No 1
Cbr-Mir-277-P1 cbr-mir-232-1 MIR-277 None MIMAT0000497 IV 7400660 7400721 + Protostomia Protostomia No
Cbr-Mir-277-P2 cbr-mir-232-2 MIR-277 None MIMAT0000497 IV 8370520 8370581 - Protostomia Protostomia No
Cgi-Mir-279 None MIR-279 None None scaffold43988 13126 13181 - Protostomia Protostomia No 1 1
Isc-Mir-279 isc-mir-279 MIR-279 None MIMAT0012694 DS634011 38521 38578 + Protostomia Protostomia No 1
Lgi-Mir-279 lgi-mir-279 MIR-279 None MIMAT0009593 sca_70 133228 133287 - Protostomia Protostomia No 1
Bge-Mir-317 None MIR-317 None None KZ615986.1 65403 65466 - Protostomia Protostomia No 1
Cte-Mir-317 cte-mir-317 MIR-317 None MIMAT0009542 scaffold_114 444019 444076 - Protostomia Protostomia No 1 1
Dan-Mir-317 dan-mir-317 MIR-317 None MIMAT0008452 scaffold_13340 6480005 6480070 + Protostomia Protostomia No 1
Dme-Mir-317 dme-mir-317 MIR-317 MIMAT0020843 MIMAT0000409 chr3R 10091139 10091204 + Protostomia Protostomia No
Dmo-Mir-317 dmo-mir-317 MIR-317 None MIMAT0008671 scaffold_6540 11898873 11898936 - Protostomia Protostomia No 1
Dpu-Mir-317 dpu-mir-317 MIR-317 None MIMAT0012661 DAPPUscaffold_4 1243961 1244027 - Protostomia Protostomia No 1
Hme-Mir-317 None MIR-317 None None HE667979 27841 27903 - Protostomia Protostomia No 1
Isc-Mir-317 isc-mir-317 MIR-317 None MIMAT0012699 DS891538 57439 57502 - Protostomia Protostomia No 1 1
Lgi-Mir-317 lgi-mir-317 MIR-317 None MIMAT0009597 sca_10 851891 851951 + Protostomia Protostomia No 1
Tca-Mir-317 tca-mir-317 MIR-317 MIMAT0019130 MIMAT0008390 LG7 14490230 14490291 + Protostomia Protostomia No 1
Aae-Mir-750 aae-mir-1174 MIR-750 None MIMAT0014265 supercont1.125 1647834 1647944 + Protostomia Protostomia No 1
Asu-Mir-750 asu-mir-750 MIR-750 MIMAT0021527 MIMAT0021528 Scaffold33 575078 575140 + Protostomia Protostomia None
Bge-Mir-750 None MIR-750 None None KZ615462.1 198724 198809 - Protostomia Protostomia No 1
Cgi-Mir-750 None MIR-750 None None scaffold514 103030 103087 - Protostomia Protostomia No 1
Cte-Mir-750 cte-mir-750 MIR-750 None MIMAT0009547 scaffold_910 14366 14434 + Protostomia Protostomia No 1 1
Dpu-Mir-750 None MIR-750 None None DAPPUscaffold_113 97296 97448 + Protostomia Protostomia No 1
Hme-Mir-750 None MIR-750 None None HE669540 33040 33101 + Protostomia Protostomia No 1
Isc-Mir-750 isc-mir-750 MIR-750 None MIMAT0012704 DS874548 52982 53046 - Protostomia Protostomia No
Lan-Mir-750 None MIR-750 None None LFEI01000307 97855 97918 + Protostomia Protostomia No
Lgi-Mir-750 lgi-mir-750 MIR-750 None MIMAT0009600 sca_236 113228 113290 + Protostomia Protostomia No
Tca-Mir-750 tca-mir-750 MIR-750 MIMAT0018820 MIMAT0018821 LG4 9452255 9452313 + Protostomia Protostomia No 1
Aae-Mir-1175 aae-mir-1175 MIR-1175 MIMAT0014264 MIMAT0015371 supercont1.125 1648037 1648098 + Protostomia Protostomia No
Asu-Mir-1175 asu-mir-1175 MIR-1175 MIMAT0021533 MIMAT0021534 Scaffold33 575559 575621 + Protostomia Protostomia No
Bge-Mir-1175 None MIR-1175 None None KZ615462.1 194645 194703 - Protostomia Protostomia No 1
Cgi-Mir-1175 None MIR-1175 None None scaffold514 99890 99948 - Protostomia Protostomia No 1
Cte-Mir-1175 cte-mir-1175 MIR-1175 MIMAT0009549 MIMAT0009550 scaffold_910 15451 15510 + Protostomia Protostomia No 1
Dan-Mir-1175 None MIR-1175 None None scaffold_13337 22380422 22380484 - Protostomia Protostomia No 1
Dme-Mir-1175 dme-mir-958 MIR-1175 MIMAT0020852 MIMAT0005471 chr3L 22669302 22669365 - Protostomia Protostomia No 1 1
Dmo-Mir-1175 None MIR-1175 None None scaffold_6680 22084844 22084907 + Protostomia Protostomia No 1 1
Dpu-Mir-1175 None MIR-1175 None None DAPPUscaffold_113 97594 97659 + Protostomia Protostomia No 1
Hme-Mir-1175 hme-mir-1175 MIR-1175 MIMAT0024935 None HE669540 33194 33255 + Protostomia Protostomia No 1
Isc-Mir-1175 None MIR-1175 None None DS874548 51774 51835 - Protostomia Protostomia No 1
Lan-Mir-1175 None MIR-1175 None None LFEI01000307 100482 100541 + Protostomia Protostomia No 1
Lgi-Mir-1175 lgi-mir-1175 MIR-1175 MIMAT0009602 MIMAT0009603 sca_236 116361 116422 + Protostomia Protostomia No 1
Tca-Mir-1175 tca-mir-1175 MIR-1175 MIMAT0018818 MIMAT0018819 LG4 9452407 9452465 + Protostomia Protostomia No 1
Cbr-Mir-1993 cbr-mir-60 MIR-1993 None MIMAT0000479 II 9414189 9414250 + Protostomia Protostomia No
Cel-Mir-1993 cel-mir-60 MIR-1993 MIMAT0015102 MIMAT0000032 chrII 6328717 6328778 - Protostomia Protostomia No
Cgi-Mir-1993 None MIR-1993 None None scaffold506 136468 136528 + Protostomia Protostomia No 1
Cte-Mir-1993 cte-mir-1993 MIR-1993 None MIMAT0009701 scaffold_421 174512 174569 + Protostomia Protostomia No 1
Dpu-Mir-1993 None MIR-1993 None None DAPPUscaffold_21 1050964 1051024 + Protostomia Protostomia No 1
Isc-Mir-1993 isc-mir-1993 MIR-1993 None MIMAT0016929 DS862055 112 174 + Protostomia Protostomia No 1
Lan-Mir-1993 None MIR-1993 None None LFEI01000043 481412 481471 - Protostomia Protostomia No 1
Lgi-Mir-1993 lgi-mir-1993 MIR-1993 None MIMAT0009723 sca_1 2120424 2120483 + Protostomia Protostomia No 1

Get sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all